Andreas Tille <andreas(a)an3as.eu> writes:
Hi,
regarding tophat I would like to mention that in Debian we had some
trouble to build it with latest seqan library. This was solved recently
and patches are forwarded upstream (and available in Debian packaging
repository - feel free to ping me for more advise if you have no clue
how to find this).
That was the problem with the recent fedora seqan packaging. I used the
bundled version, but I'll check the Debian changes, which weren't there
when I looked originally. Thanks for the info.
I'd welcome better contact between Fedora scitech and Debian Med
(debian-med(a)lists.debian.org) and Debian Science
(debian-science(a)lists.debian.org).
For what it's worth, if I have something non-trivial to package -- which
I try to do with everything free-ish that's installed on our cluster --
I look for Debian packaging to start with (and possibly OpenSuSE
science, but a lot of that isn't too clean). I'm typing this at a
Debian desktop...