https://bugzilla.redhat.com/show_bug.cgi?id=1829523
Bug ID: 1829523
Summary: Review Request: python-pysam - reading, manipulating
and writing genomic data sets
Product: Fedora
Version: rawhide
Hardware: All
OS: Linux
Status: NEW
Component: Package Review
Severity: medium
Priority: medium
Assignee: nobody(a)fedoraproject.org
Reporter: david08741(a)gmail.com
QA Contact: extras-qa(a)fedoraproject.org
CC: package-review(a)lists.fedoraproject.org
Target Milestone: ---
Classification: Fedora
Spec URL:
https://download.copr.fedorainfracloud.org/results/davidsch/testing/fedor...
SRPM URL:
https://download.copr.fedorainfracloud.org/results/davidsch/testing/fedor...
Description:
pysam - a python module for reading, manipulating and writing genomic data
sets.
pysam is a lightweight wrapper of the htslib C-API and provides facilities to
read and write SAM/BAM/VCF/BCF/BED/GFF/GTF/FASTA/FASTQ files as well as access
to the command line functionality of the samtools and bcftools packages. The
module supports compression and random access through indexing.
This module provides a low-level wrapper around the htslib C-API as using
cython and a high-level API for convenient access to the data within standard
genomic file formats.
See:
http://www.htslib.org https://github.com/pysam-developers/pysam
http://pysam.readthedocs.org/en/stable
Fedora Account System Username: davidsch
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