https://bugzilla.redhat.com/show_bug.cgi?id=1767062
Bug ID: 1767062
Summary: Review Request: R-Rhtslib - HTSlib high-throughput
sequencing library as an R package
Product: Fedora
Version: rawhide
Hardware: All
OS: Linux
Status: NEW
Component: Package Review
Severity: medium
Priority: medium
Assignee: nobody(a)fedoraproject.org
Reporter: tcallawa(a)redhat.com
QA Contact: extras-qa(a)fedoraproject.org
CC: package-review(a)lists.fedoraproject.org
Target Milestone: ---
Classification: Fedora
Spec URL:
https://spot.fedorapeople.org/R-Rhtslib.spec
SRPM URL:
https://spot.fedorapeople.org/R-Rhtslib-1.16.3-1.fc31.src.rpm
Description:
This package provides version 1.7 of the 'HTSlib' C library for
high-throughput sequence analysis. The package is primarily useful to
developers of other R packages who wish to make use of HTSlib. Motivation and
instructions for use of this package are in the vignette,
vignette(package="Rhtslib", "Rhtslib").
Fedora Account System Username: spot
Rawhide Scratch Build:
https://koji.fedoraproject.org/koji/taskinfo?taskID=38664468
A few notes: While there is already an htslib package in Fedora, it is very
different, as this R module has stuck to an older code branch (and may have
made local changes). This specific module is needed for R-Rsamtools to update
to the latest version, which also frees up the Fedora samtools package to
update to the current version.
Basically, I need R-Rhtslib to keep R-Rsamtools alive.
Also, there is one zero-length test file in R-Rhtslib. This is intentionally
empty. Please ignore the rpmlint error there.
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