https://bugzilla.redhat.com/show_bug.cgi?id=708402
--- Comment #14 from Dave Love d.love@liverpool.ac.uk --- For what it's worth, http://www.ccb.jhu.edu/software/tophat/index.shtml now says tophat is "largely superseded". There's a quick go at hisat2, the replacement, in the above copr; it hasn't been tested, though.
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