https://bugzilla.redhat.com/show_bug.cgi?id=1340473
Honggang LI <honli(a)redhat.com> changed:
What |Removed |Added
----------------------------------------------------------------------------
CC| |mschmidt(a)redhat.com
Flags| |needinfo?(mschmidt(a)redhat.c
| |om)
--- Comment #2 from Honggang LI <honli(a)redhat.com> ---
Hi, Michal
Issue 1:
Please provide justifies for bundle libraries: hydra, openpa, romio, mpl.
Issue 2:
mvapich2.spec line 52, please replace 'MPI 3.0' with 'MPI 3.1'.
Issue 3:
Please install mvapich2-2.2rc1/www/index.html into /usr/share/doc/mvapich2 . It
is missing now.
Issue 4:
Please install/package up these files, 'README.envvar', 'CHANGES',
'CHANGELOG',
and 'RELEASE_NOTES' into mvapich2-doc subpackage. Especially, the
'README.envvar' file includes mvapich2 environment parameters, it is very
important for mvapich2 performance tuning.
Issue 5:
mvapich2-devel subpackage MUST require gcc-c++ and gcc. The gcc package may be
available for most machine used for coding/compiling. However, the gcc-c++ is
not. I can't compile mvapich2 example program in C++ after install the mvapich2
rpm packages because gcc-c++ is missing.
Issue 6:
Please check why mvapich2 fortran module files are missing.
[root@rdma-dev-03 ~]$ ls /usr/lib64/gfortran/modules/*
/usr/lib64/gfortran/modules/mpich:
mpi_base.mod mpi_constants.mod mpi.mod mpi_sizeofs.mod
/usr/lib64/gfortran/modules/mvapich2:
/usr/lib64/gfortran/modules/openmpi:
mpi_ext.mod mpi_f08_interfaces_callbacks.mod mpi_f08_types.mod
mpi_f08_callbacks.mod mpi_f08_interfaces.mod mpi.mod
mpi_f08_ext.mod mpi_f08.mod
pmpi_f08_interfaces.mod
Issue 7:
I know you had setup '--enable-wrapper-rpath=no' for configure. However, it
seems something is wrong. You may need chrpath to fix
"binary-or-shlib-defines-rpath" issue.
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpivars ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpirun_rsh ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpiname ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/lib/libmpicxx.so.12.0.5 ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpispawn ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/lib/libmpifort.so.12.0.5 ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpiexec.mpirun_rsh ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpichversion ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/lib/libmpi.so.12.0.5 ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/lib/libmpifort.so.12.0.5 ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpispawn ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/lib/libmpi.so.12.0.5 ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpichversion ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpiexec.mpirun_rsh ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpirun_rsh ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/lib/libmpicxx.so.12.0.5 ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpivars ['/lib']
mvapich2.x86_64: E: binary-or-shlib-defines-rpath
/usr/lib64/mvapich2/bin/mpiname ['/lib']
Issue 8:
[root@rdma-dev-03 ~]$ cat /usr/lib/rpm/macros.d/macros.mvapich2-x86_64
%_mvapich2_load \
. /etc/profile.d/modules.sh; \
module load mpi/mvapich2-%{_arch}; \
export CFLAGS="$CFLAGS %{optflags}"; <---Please remove it.
%_mvapich2_unload \
. /etc/profile.d/modules.sh; \
module unload mpi/mvapich2-%{_arch};
Issue 9:
Please delete this line from the mvapich2.spec file.
mkdir %{buildroot}%{_mandir}/%{namearch}/man{2,4,5,6,7,8,9,n}
Issue 10:
Massive "undefined-non-weak-symbol" issue for MPI APIs.
mvapich2.x86_64: W: undefined-non-weak-symbol
/usr/lib64/mvapich2/lib/libmpifort.so.12.0.5 MPI_UNWEIGHTED
$ grep undefined-non-weak-symbol review.txt |awk '{print $1, $4}'|sort|uniq -c
248 mvapich2.x86_64: /usr/lib64/mvapich2/lib/libmpicxx.so.12.0.5
384 mvapich2.x86_64: /usr/lib64/mvapich2/lib/libmpifort.so.12.0.5
Those symbols are defined in libmpi.so.12.0.5.
Issue 11:
"unused-direct-shlib-dependency" issue for libmpicxx.so.12.0.5 and
libmpifort.so.12.0.5. It maybe can be ignored.
Issue 12;
[ ]: Package requires other packages for directories it uses.
Note: No known owner of /usr/lib64/gfortran,
/usr/share/modulefiles/mpi
[ ]: Package must own all directories that it creates.
Note: Directories without known owners: /usr/lib64/gfortran,
/usr/lib64/python3.5/site-packages, /usr/lib64/gfortran/modules,
/usr/lib/rpm/macros.d, /usr/share/modulefiles/mpi,
/usr/lib64/python3.5, /usr/lib64/python2.7, /usr/lib64/python2.7/site-
packages, /usr/lib/rpm
I will ignore these issues, as they are false positives.
mvapich2.x86_64: E: invalid-locale-man-dir
/usr/share/man/mvapich2-x86_64/man1/hydra_nameserver.1.gz
mvapich2.x86_64: W: file-not-in-%lang
/usr/share/man/mvapich2-x86_64/man1/hydra_nameserver.1.gz
Thanks
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