c4chris pushed to hmmer (rawhide). "Update to new upstream version"
by notificationsï¼ fedoraproject.org
Notification time stamped 2022-07-31 23:54:39 UTC
From c0c76fd357afe6467df258acdb8f5263e3fd155f Mon Sep 17 00:00:00 2001
From: Christian Iseli <Christian.Iseli(a)unil.ch>
Date: Jul 31 2022 23:55:49 +0000
Subject: Update to new upstream version
---
diff --git a/.gitignore b/.gitignore
index 0b22811..a8217d0 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,3 +1,4 @@
hmmer-3.0.tar.gz
/hmmer-3.1b1.tar.gz
/hmmer-3.1b2.tar.gz
+/hmmer-3.3.2.tar.gz
diff --git a/hmmer.spec b/hmmer.spec
index 6e2240e..5ab8d48 100644
--- a/hmmer.spec
+++ b/hmmer.spec
@@ -1,28 +1,25 @@
Name: hmmer
-Version: 3.1b2
-Release: 18%{?dist}
-Summary: Profile HMM software for protein sequence analysis
+Version: 3.3.2
+Release: 1%{?dist}
+Summary: Biosequence analysis using profile hidden Markov models
License: GPLv3
-URL: http://hmmer.janelia.org
-Source0: http://selab.janelia.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz
+URL: http://hmmer.org
+Source0: http://eddylab.org/software/hmmer/hmmer-%{version}.tar.gz
BuildRequires: perl
BuildRequires: make
%description
-Profile hidden Markov models (profile HMMs) can be used to do sensitive
-database searching using statistical descriptions of a sequence family's
-consensus. HMMER is a freely distributable implementation of profile HMM
-software for protein sequence analysis.
+HMMER is used for searching sequence databases for sequence homologs, and for
+making sequence alignments. It implements methods using probabilistic models
+called profile hidden Markov models (profile HMMs).
-%package devel
-Summary: Library and header files to include hmmer code in other apps
-Provides: hmmer-static = %{version}-%{release}
+%package easel
+Summary: Easel collection of small tools
-%description devel
+%description easel
-Header files and a library of hmmer functions, for developing apps
-which will use the library.
+Collection of additional small tools ("miniapps") from the Easel library.
%package doc
Summary: Documentation for hmmer
@@ -34,8 +31,6 @@ This package includes documentation files for the hmmer software package.
%prep
%setup -q
-# See if this helps building on power arch
-sed -i '/impl_choice=vmx;;/d' configure
%build
@@ -50,25 +45,41 @@ make check
%install
rm -rf $RPM_BUILD_ROOT
make install DESTDIR=$RPM_BUILD_ROOT
-
+(cd easel; make install DESTDIR=$RPM_BUILD_ROOT)
%files
%license LICENSE
-%{_bindir}/*
-%{_mandir}/man1/*
-
-
-%files devel
-%{_includedir}/*
-%{_libdir}/*.a
+%{_bindir}/hmm*
+%{_bindir}/alimask
+%{_bindir}/jackhmmer
+%{_bindir}/makehmmerdb
+%{_bindir}/nhmmer
+%{_bindir}/nhmmscan
+%{_bindir}/phmmer
+%{_mandir}/man1/hmm*
+%{_mandir}/man1/alimask*
+%{_mandir}/man1/jackhmmer*
+%{_mandir}/man1/makehmmerdb*
+%{_mandir}/man1/nhmmer*
+%{_mandir}/man1/nhmmscan*
+%{_mandir}/man1/phmmer*
+
+
+%files easel
+%{_bindir}/easel
+%{_bindir}/esl-*
+%{_mandir}/man1/esl-*
%files doc
-%doc COPYRIGHT README release-notes Userguide.pdf tutorial/
+%doc LICENSE README.md RELEASE-%{version}.md Userguide.pdf tutorial/
%changelog
+* Sun Jul 31 2022 Christian Iseli <Christian.Iseli(a)unil.ch> - 3.3.2-1
+- Update to new upstream version
+
* Thu Jul 21 2022 Fedora Release Engineering <releng(a)fedoraproject.org> - 3.1b2-18
- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
diff --git a/sources b/sources
index 5921f6a..9b5bbd5 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-c8c141018bc0ccd7fc37b33f2b945d5f hmmer-3.1b2.tar.gz
+SHA512 (hmmer-3.3.2.tar.gz) = 42d522b45b6a9b8bbf5fe737655d68bab4f8f7f9ef705094950f1ed8bc62031790394e82f30795c1cce57d6b533745808e6a33f3340df20acbec97ecfd7e9184
https://src.fedoraproject.org/rpms/hmmer/c/c0c76fd357afe6467df258acdb8f52...
1Â year, 4Â months
rcallicotte pushed to python-urwid-readline (epel9). "Initial import
fedora#2042407"
by notificationsï¼ fedoraproject.org
Notification time stamped 2022-07-31 23:04:02 UTC
From f92cb4b94b21f02eb1160f34ef37ddbe8c397f06 Mon Sep 17 00:00:00 2001
From: Robby Callicotte <rcallicotte(a)fedoraproject.org>
Date: Jan 20 2022 22:07:08 +0000
Subject: Initial import fedora#2042407
---
diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..269e530
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1 @@
+/urwid_readline-0.13.tar.gz
diff --git a/python-urwid-readline.spec b/python-urwid-readline.spec
new file mode 100644
index 0000000..611cfa0
--- /dev/null
+++ b/python-urwid-readline.spec
@@ -0,0 +1,56 @@
+%global upstream_name urwid_readline
+Name: python-urwid-readline
+Version: 0.13
+Release: 1%{?dist}
+Summary: A textbox edit widget for urwid that supports readline shortcuts
+
+License: MIT
+URL: https://github.com/rr-/urwid_readline
+Source0: %{url}/archive/%{version}/%{upstream_name}-%{version}.tar.gz
+
+BuildArch: noarch
+BuildRequires: python3-devel
+BuildRequires: python3-pytest
+
+
+%global _description %{expand:
+A textbox edit widget for urwid that supports readline shortcuts.}
+
+
+%description %_description
+
+%package -n python3-urwid-readline
+Summary: %{summary}
+
+%description -n python3-urwid-readline %_description
+
+
+%prep
+%autosetup -p1 -n %{upstream_name}-%{version}
+
+
+%generate_buildrequires
+%pyproject_buildrequires -r
+
+
+%build
+%pyproject_wheel
+
+
+%install
+%pyproject_install
+%pyproject_save_files %{upstream_name}
+
+
+%check
+%pytest
+
+
+%files -n python3-urwid-readline -f %{pyproject_files}
+%doc README.md
+%license LICENSE LICENSE.md
+
+
+%changelog
+* Tue Jan 18 2022 Robby Callicotte <rcallicotte(a)fedoraproject.org> - 0.13-1
+- Initial build
diff --git a/sources b/sources
new file mode 100644
index 0000000..6c9b372
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+SHA512 (urwid_readline-0.13.tar.gz) = 49087b2b0e47d6adba317941b6be99d7d61fd66ae28fa2ed89730c24cc04b8fa4ce20cb8eb35ebab56f838491432684bb8892463439dcd5d06d087b509182d3d
https://src.fedoraproject.org/rpms/python-urwid-readline/c/f92cb4b94b21f0...
1Â year, 4Â months
rcallicotte pushed to python-urwid-readline (epel9). "Rebuilt for
Python 3.11"
by notificationsï¼ fedoraproject.org
Notification time stamped 2022-07-31 23:04:02 UTC
From ec4d24d4467fa3b55186b7a0b3845ed6cdd8f74e Mon Sep 17 00:00:00 2001
From: Python Maint <python-maint(a)redhat.com>
Date: Jun 13 2022 15:17:02 +0000
Subject: Rebuilt for Python 3.11
---
diff --git a/python-urwid-readline.spec b/python-urwid-readline.spec
index 611cfa0..01a2439 100644
--- a/python-urwid-readline.spec
+++ b/python-urwid-readline.spec
@@ -1,7 +1,7 @@
%global upstream_name urwid_readline
Name: python-urwid-readline
Version: 0.13
-Release: 1%{?dist}
+Release: 2%{?dist}
Summary: A textbox edit widget for urwid that supports readline shortcuts
License: MIT
@@ -52,5 +52,8 @@ Summary: %{summary}
%changelog
+* Mon Jun 13 2022 Python Maint <python-maint(a)redhat.com> - 0.13-2
+- Rebuilt for Python 3.11
+
* Tue Jan 18 2022 Robby Callicotte <rcallicotte(a)fedoraproject.org> - 0.13-1
- Initial build
https://src.fedoraproject.org/rpms/python-urwid-readline/c/ec4d24d4467fa3...
1Â year, 4Â months
atim pushed to nwg-panel (f35). "chore(update): 0.7.3"
by notificationsï¼ fedoraproject.org
Notification time stamped 2022-07-31 22:40:01 UTC
From 9c1dbd6420d553bfc1acce474dc3abe15b5a01b0 Mon Sep 17 00:00:00 2001
From: Artem Polishchuk <ego.cordatus(a)gmail.com>
Date: Jul 31 2022 22:24:39 +0000
Subject: chore(update): 0.7.3
---
diff --git a/.gitignore b/.gitignore
index e2c8791..85f5361 100644
--- a/.gitignore
+++ b/.gitignore
@@ -21,3 +21,4 @@
/nwg-panel-0.6.4.tar.gz
/nwg-panel-0.7.0.tar.gz
/nwg-panel-0.7.1.tar.gz
+/nwg-panel-0.7.3.tar.gz
diff --git a/nwg-panel.spec b/nwg-panel.spec
index 6601367..b8fec80 100644
--- a/nwg-panel.spec
+++ b/nwg-panel.spec
@@ -1,7 +1,7 @@
%global sys_name nwg_panel
Name: nwg-panel
-Version: 0.7.1
+Version: 0.7.3
Release: %autorelease
Summary: GTK3-based panel for sway window manager
BuildArch: noarch
diff --git a/sources b/sources
index 23a26c6..9065c4d 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (nwg-panel-0.7.1.tar.gz) = bdb730d2b7d5ffc0ded86c505bc2a6bb70c88d514d02c2fc426dba9c77c17daa6d04d9a41b212a0ba286106a0109be4213af37192cedd01274e9d11e02e0437c
+SHA512 (nwg-panel-0.7.3.tar.gz) = 87ce4a45411a260a6343d640077c8108881299c3313c9f5c4ae87065c0fe5ddec419e76bac9e7cb27ea5c71a124e0f05e5b82f0a8dc1b71bf56fc589fb3c2b81
https://src.fedoraproject.org/rpms/nwg-panel/c/9c1dbd6420d553bfc1acce474d...
1Â year, 4Â months
atim pushed to nwg-panel (f36). "chore(update): 0.7.3"
by notificationsï¼ fedoraproject.org
Notification time stamped 2022-07-31 22:32:28 UTC
From 9c1dbd6420d553bfc1acce474dc3abe15b5a01b0 Mon Sep 17 00:00:00 2001
From: Artem Polishchuk <ego.cordatus(a)gmail.com>
Date: Jul 31 2022 22:24:39 +0000
Subject: chore(update): 0.7.3
---
diff --git a/.gitignore b/.gitignore
index e2c8791..85f5361 100644
--- a/.gitignore
+++ b/.gitignore
@@ -21,3 +21,4 @@
/nwg-panel-0.6.4.tar.gz
/nwg-panel-0.7.0.tar.gz
/nwg-panel-0.7.1.tar.gz
+/nwg-panel-0.7.3.tar.gz
diff --git a/nwg-panel.spec b/nwg-panel.spec
index 6601367..b8fec80 100644
--- a/nwg-panel.spec
+++ b/nwg-panel.spec
@@ -1,7 +1,7 @@
%global sys_name nwg_panel
Name: nwg-panel
-Version: 0.7.1
+Version: 0.7.3
Release: %autorelease
Summary: GTK3-based panel for sway window manager
BuildArch: noarch
diff --git a/sources b/sources
index 23a26c6..9065c4d 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (nwg-panel-0.7.1.tar.gz) = bdb730d2b7d5ffc0ded86c505bc2a6bb70c88d514d02c2fc426dba9c77c17daa6d04d9a41b212a0ba286106a0109be4213af37192cedd01274e9d11e02e0437c
+SHA512 (nwg-panel-0.7.3.tar.gz) = 87ce4a45411a260a6343d640077c8108881299c3313c9f5c4ae87065c0fe5ddec419e76bac9e7cb27ea5c71a124e0f05e5b82f0a8dc1b71bf56fc589fb3c2b81
https://src.fedoraproject.org/rpms/nwg-panel/c/9c1dbd6420d553bfc1acce474d...
1Â year, 4Â months
atim pushed to nwg-panel (rawhide). "chore(update): 0.7.3"
by notificationsï¼ fedoraproject.org
Notification time stamped 2022-07-31 22:25:06 UTC
From 9c1dbd6420d553bfc1acce474dc3abe15b5a01b0 Mon Sep 17 00:00:00 2001
From: Artem Polishchuk <ego.cordatus(a)gmail.com>
Date: Jul 31 2022 22:24:39 +0000
Subject: chore(update): 0.7.3
---
diff --git a/.gitignore b/.gitignore
index e2c8791..85f5361 100644
--- a/.gitignore
+++ b/.gitignore
@@ -21,3 +21,4 @@
/nwg-panel-0.6.4.tar.gz
/nwg-panel-0.7.0.tar.gz
/nwg-panel-0.7.1.tar.gz
+/nwg-panel-0.7.3.tar.gz
diff --git a/nwg-panel.spec b/nwg-panel.spec
index 6601367..b8fec80 100644
--- a/nwg-panel.spec
+++ b/nwg-panel.spec
@@ -1,7 +1,7 @@
%global sys_name nwg_panel
Name: nwg-panel
-Version: 0.7.1
+Version: 0.7.3
Release: %autorelease
Summary: GTK3-based panel for sway window manager
BuildArch: noarch
diff --git a/sources b/sources
index 23a26c6..9065c4d 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (nwg-panel-0.7.1.tar.gz) = bdb730d2b7d5ffc0ded86c505bc2a6bb70c88d514d02c2fc426dba9c77c17daa6d04d9a41b212a0ba286106a0109be4213af37192cedd01274e9d11e02e0437c
+SHA512 (nwg-panel-0.7.3.tar.gz) = 87ce4a45411a260a6343d640077c8108881299c3313c9f5c4ae87065c0fe5ddec419e76bac9e7cb27ea5c71a124e0f05e5b82f0a8dc1b71bf56fc589fb3c2b81
https://src.fedoraproject.org/rpms/nwg-panel/c/9c1dbd6420d553bfc1acce474d...
1Â year, 4Â months