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Fedora Update Notification
FEDORA-2017-6a7d07f046
2017-04-01 16:46:19.645248
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Name : bionetgen
Product : Fedora 26
Version : 2.2.6
Release : 7.fc26
URL :
https://github.com/RuleWorld/bionetgen
Summary : Software for rule-based modeling of biochemical systems
Description :
BioNetGen is software for the specification and simulation of
rule-based models of biochemical systems, including signal
transduction, metabolic, and genetic regulatory networks. The
BioNetGen language has recently been extended to include explicit
representation of compartments. A review of methods for rule-based
modeling is available in Science Signaling (Sci. STKE, 18 July 2006,
Issue 344, p. re6).
BioNetGen is presently a mixture of Perl and C++. Network generation
is currently implemented in Perl, the network simulator is C++, and a
new language parser is being developed with ANTLR.
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Update Information:
- Add KLU support to sundials - Build Sundials OpenMPI libraries on EPEL -
Bionetgen rebuilds - python-assimulo rebuilds
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References:
[ 1 ] Bug #1428644 - sundials is not compled to support KLU
https://bugzilla.redhat.com/show_bug.cgi?id=1428644
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This update can be installed with the "dnf" update program. Use
su -c 'dnf upgrade bionetgen' at the command line.
For more information, refer to the dnf documentation available at
http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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