Fedora 28 Update: R-bit64-0.9.7-3.fc28
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2018-050da4f07f
2018-05-31 14:34:44.120573
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Name : R-bit64
Product : Fedora 28
Version : 0.9.7
Release : 3.fc28
URL : https://cran.r-project.org/web/packages/bit64/index.html
Summary : A S3 Class for Vectors of 64bit Integers
Description :
Package 'bit64' provides serializable S3 atomic 64bit (signed) integers. These
are useful for handling database keys and exact counting in +-2^63. WARNING: do
not use them as replacement for 32bit integers, integer64 are not supported for
subscripting by R-core and they have different semantics when combined with
double, e.g. integer64 + double => integer64. Class integer64 can be used in
vectors, matrices, arrays and data.frames. Methods are available for coercion
from and to logicals, integers, doubles, characters and factors as well as many
elementwise and summary functions. Many fast algorithmic operations such as
'match' and 'order' support interactive data exploration and manipulation and
optionally leverage caching.
--------------------------------------------------------------------------------
Update Information:
Update R to 3.5.0. Rebuild rpy and rkward to match. rpy updated to 2.9.3 in
Fedora 28. All compiled R packages rebuilt (except for R-shogun, because shogun
doesn't build right now). Most updated to the latest version.
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1567573 - rpy-2.9.3 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1567573
[ 2 ] Bug #1570804 - R-3.5.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1570804
[ 3 ] Bug #1555530 - R-affyio: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555530
[ 4 ] Bug #1555528 - R-affy: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555528
[ 5 ] Bug #1555498 - R-Biostrings: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555498
[ 6 ] Bug #1555532 - R-bitops: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555532
[ 7 ] Bug #1555533 - R-caTools: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555533
[ 8 ] Bug #1560254 - R-curl-3.2 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1560254
[ 9 ] Bug #1575172 - R-httpuv-1.4.3 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1575172
[ 10 ] Bug #1563656 - R-lmtest-0.9-36 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1563656
[ 11 ] Bug #1555547 - R-maanova: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555547
[ 12 ] Bug #1555552 - R-msm: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555552
[ 13 ] Bug #1555555 - R-multtest: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555555
[ 14 ] Bug #1555556 - R-mvtnorm: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555556
[ 15 ] Bug #1555561 - R-preprocessCore: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555561
[ 16 ] Bug #1555564 - R-rlecuyer: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555564
[ 17 ] Bug #1555515 - R-ROC: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555515
[ 18 ] Bug #1555516 - R-RODBC: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555516
[ 19 ] Bug #1555521 - R-Rsolid: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555521
[ 20 ] Bug #1555569 - R-statmod: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555569
[ 21 ] Bug #1574116 - R-stringi-1.2.2 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1574116
[ 22 ] Bug #1555574 - R-waveslim: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555574
[ 23 ] Bug #1555575 - R-wavethresh: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555575
[ 24 ] Bug #1555525 - R-XML: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555525
[ 25 ] Bug #1405667 - R-zoo-1.8-1 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1405667
[ 26 ] Bug #1578961 - Review Request: R-prettyunits - Pretty, Human Readable Formatting of Quantities
https://bugzilla.redhat.com/show_bug.cgi?id=1578961
[ 27 ] Bug #1578963 - Review Request: R-blob - A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')
https://bugzilla.redhat.com/show_bug.cgi?id=1578963
[ 28 ] Bug #1556527 - v8-314: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1556527
--------------------------------------------------------------------------------
This update can be installed with the "dnf" update program. Use
su -c 'dnf upgrade --advisory FEDORA-2018-050da4f07f' at the command
line. For more information, refer to the dnf documentation available at
http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
6 years
Fedora 28 Update: R-bit-1.1.13-1.fc28
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2018-050da4f07f
2018-05-31 14:34:44.120573
--------------------------------------------------------------------------------
Name : R-bit
Product : Fedora 28
Version : 1.1.13
Release : 1.fc28
URL : https://cran.r-project.org/web/packages/bit/index.html
Summary : A class for vectors of 1-bit booleans
Description :
bitmapped vectors of booleans (no NAs), coercion from and to logicals,
integers and integer subscripts; fast boolean operators and fast summary
statistics. With 'bit' vectors you can store true binary booleans
{FALSE,TRUE} at the expense of 1 bit only, on a 32 bit architecture this
means factor 32 less RAM and ~ factor 32 more speed on boolean operations.
Due to overhead of R calls, actual speed gain depends on the size of the
vector: expect gains for vectors of size > 10000 elements. Even for
one-time boolean operations it can pay-off to convert to bit, the pay-off
is obvious, when such components are used more than once. Reading from and
writing to bit is approximately as fast as accessing standard logicals -
mostly due to R's time for memory allocation. The package allows to work
with pre-allocated memory for return values by calling .Call() directly:
when evaluating the speed of C-access with pre-allocated vector memory,
coping from bit to logical requires only 70% of the time for copying from
logical to logical; and copying from logical to bit comes at a performance
penalty of 150%. the package now contains further classes for representing
logical selections: 'bitwhich' for very skewed selections and 'ri' for
selecting ranges of values for chunked processing. All three index classes
can be used for subsetting 'ff' objects (ff-2.1-0 and higher).
--------------------------------------------------------------------------------
Update Information:
Update R to 3.5.0. Rebuild rpy and rkward to match. rpy updated to 2.9.3 in
Fedora 28. All compiled R packages rebuilt (except for R-shogun, because shogun
doesn't build right now). Most updated to the latest version.
--------------------------------------------------------------------------------
ChangeLog:
* Wed May 16 2018 Tom Callaway <spot(a)fedoraproject.org> - 1.1.13-1
- update to 1.1-13, rebuild for R 3.5.0
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1567573 - rpy-2.9.3 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1567573
[ 2 ] Bug #1570804 - R-3.5.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1570804
[ 3 ] Bug #1555530 - R-affyio: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555530
[ 4 ] Bug #1555528 - R-affy: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555528
[ 5 ] Bug #1555498 - R-Biostrings: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555498
[ 6 ] Bug #1555532 - R-bitops: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555532
[ 7 ] Bug #1555533 - R-caTools: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555533
[ 8 ] Bug #1560254 - R-curl-3.2 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1560254
[ 9 ] Bug #1575172 - R-httpuv-1.4.3 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1575172
[ 10 ] Bug #1563656 - R-lmtest-0.9-36 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1563656
[ 11 ] Bug #1555547 - R-maanova: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555547
[ 12 ] Bug #1555552 - R-msm: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555552
[ 13 ] Bug #1555555 - R-multtest: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555555
[ 14 ] Bug #1555556 - R-mvtnorm: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555556
[ 15 ] Bug #1555561 - R-preprocessCore: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555561
[ 16 ] Bug #1555564 - R-rlecuyer: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555564
[ 17 ] Bug #1555515 - R-ROC: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555515
[ 18 ] Bug #1555516 - R-RODBC: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555516
[ 19 ] Bug #1555521 - R-Rsolid: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555521
[ 20 ] Bug #1555569 - R-statmod: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555569
[ 21 ] Bug #1574116 - R-stringi-1.2.2 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1574116
[ 22 ] Bug #1555574 - R-waveslim: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555574
[ 23 ] Bug #1555575 - R-wavethresh: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555575
[ 24 ] Bug #1555525 - R-XML: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555525
[ 25 ] Bug #1405667 - R-zoo-1.8-1 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1405667
[ 26 ] Bug #1578961 - Review Request: R-prettyunits - Pretty, Human Readable Formatting of Quantities
https://bugzilla.redhat.com/show_bug.cgi?id=1578961
[ 27 ] Bug #1578963 - Review Request: R-blob - A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')
https://bugzilla.redhat.com/show_bug.cgi?id=1578963
[ 28 ] Bug #1556527 - v8-314: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1556527
--------------------------------------------------------------------------------
This update can be installed with the "dnf" update program. Use
su -c 'dnf upgrade --advisory FEDORA-2018-050da4f07f' at the command
line. For more information, refer to the dnf documentation available at
http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
6 years