Fedora 16 Update: R-XML-3.9.4-1.fc16
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2012-8015
2012-05-18 10:00:54
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Name : R-XML
Product : Fedora 16
Version : 3.9.4
Release : 1.fc16
URL : http://cran.r-project.org/web/packages/XML/index.html
Summary : Tools for parsing and generating xml within r and s-plus
Description :
This package provides many approaches for both reading and creating XML
(and HTML) documents (including DTDs), both local and accessible via HTTP
or FTP. It also offers access to an XPath "interpreter".
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Update Information:
Update to the new release of bioconductor
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ChangeLog:
* Thu Apr 26 2012 pingou <pingou(a)pingoured.fr> 3.9.4-1
- Update to version 3.9.4
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> 3.4.3-2
- rebuild for R 2.14.0
* Thu Nov 3 2011 pingou <pingou(a)pingoured.fr> 3.4.3-1
- Update to version 3.4.3
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This update can be installed with the "yum" update program. Use
su -c 'yum update R-XML' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years
Fedora 16 Update: R-BufferedMatrix-1.20.0-1.fc16
by updates@fedoraproject.org
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Fedora Update Notification
FEDORA-2012-8015
2012-05-18 10:00:54
--------------------------------------------------------------------------------
Name : R-BufferedMatrix
Product : Fedora 16
Version : 1.20.0
Release : 1.fc16
URL : http://bioconductor.org/packages/release/bioc/html/BufferedMatrix.html
Summary : A matrix data storage object method from bioconductor
Description :
A tabular style data object where most data is stored outside main memory.
A buffer is used to speed up access to data.
This library is part of the bioconductor (bioconductor.org) project.
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Update Information:
Update to the new release of bioconductor
--------------------------------------------------------------------------------
ChangeLog:
* Thu Apr 26 2012 pingou <pingou(a)pingoured.fr> 1.20.0-1
- Update to version 1.20.0
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> 1.18.0-2
- rebuild for R 2.14.0
* Thu Nov 3 2011 pingou <pingou(a)pingoured.fr> 1.18.0-1
- Update to version 1.18.0
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This update can be installed with the "yum" update program. Use
su -c 'yum update R-BufferedMatrix' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years
Fedora 16 Update: R-tkWidgets-1.34.0-1.fc16
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2012-8015
2012-05-18 10:00:54
--------------------------------------------------------------------------------
Name : R-tkWidgets
Product : Fedora 16
Version : 1.34.0
Release : 1.fc16
URL : http://bioconductor.org/packages/release/bioc/html/tkWidgets.html
Summary : Widgets to provide user interfaces from bioconductor
Description :
Widgets to provide user interfaces. tcltk should have been installed for
the widgets to run.
This package is a part of the bioconductor (bioconductor.org) project
--------------------------------------------------------------------------------
Update Information:
Update to the new release of bioconductor
--------------------------------------------------------------------------------
ChangeLog:
* Thu Apr 26 2012 pingou <pingou(a)pingoured.fr> 1.34.0-1
- Update to version 1.34.0
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> 1.32.0-2
- rebuild for R 2.14.0
* Thu Nov 3 2011 pingou <pingou(a)pingoured.fr> 1.32.0-1
- Update to version 1.32.0
--------------------------------------------------------------------------------
This update can be installed with the "yum" update program. Use
su -c 'yum update R-tkWidgets' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years
Fedora 16 Update: R-DynDoc-1.34.0-1.fc16
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2012-8015
2012-05-18 10:00:54
--------------------------------------------------------------------------------
Name : R-DynDoc
Product : Fedora 16
Version : 1.34.0
Release : 1.fc16
URL : http://bioconductor.org/packages/release/bioc/html/DynDoc.html
Summary : Functions for dynamic documents
Description :
A set of functions to create and interact with dynamic documents and
vignettes.
--------------------------------------------------------------------------------
Update Information:
Update to the new release of bioconductor
--------------------------------------------------------------------------------
ChangeLog:
* Thu Apr 26 2012 pingou <pingou(a)pingoured.fr> 1.34.0-1
- Update to version 1.34.0
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> 1.32.0-2
- rebuild for R 2.14.0
* Thu Nov 3 2011 pingou <pingou(a)pingoured.fr> 1.32.0-1
- Update to version 1.32.0
--------------------------------------------------------------------------------
This update can be installed with the "yum" update program. Use
su -c 'yum update R-DynDoc' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years
Fedora 16 Update: R-timeDate-2160.96-1.fc16
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2012-8015
2012-05-18 10:00:54
--------------------------------------------------------------------------------
Name : R-timeDate
Product : Fedora 16
Version : 2160.96
Release : 1.fc16
URL : http://cran.r-project.org/web/packages/timeDate/
Summary : Rmetrics - chronological and calendrical objects
Description :
Environment for teaching Financial Engineering and Computational Finance.
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Update Information:
Update to the new release of bioconductor
--------------------------------------------------------------------------------
ChangeLog:
* Thu Apr 26 2012 pingou <pingou(a)pingoured.fr> 2160.96-1
- Update to version 2160.96
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> 2131.00-1
- update to 2131.00
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This update can be installed with the "yum" update program. Use
su -c 'yum update R-timeDate' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years
Fedora 16 Update: R-qvalue-1.30.0-1.fc16
by updates@fedoraproject.org
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Fedora Update Notification
FEDORA-2012-8015
2012-05-18 10:00:54
--------------------------------------------------------------------------------
Name : R-qvalue
Product : Fedora 16
Version : 1.30.0
Release : 1.fc16
URL : http://bioconductor.org/packages/release/bioc/html/qvalue.html
Summary : Q-value estimation for false discovery rate control
Description :
It takes a list of p-values resulting from the simultaneous
testing of many hypotheses and estimates their q-values.
The q-value of a test measures the proportion of false positives
incurred (called the false discovery rate) when that particular
test is called significant. Various plots are automatically
generated, allowing one to make sensible significance cut-offs.
Several mathematical results have recently been shown on the
conservative accuracy of the estimated q-values from this software.
The software can be applied to problems in genomics, brain imaging,
astrophysics, and data mining.
This package is a part of the Bioconductor (bioconductor.org) project.
--------------------------------------------------------------------------------
Update Information:
Update to the new release of bioconductor
--------------------------------------------------------------------------------
ChangeLog:
* Thu Apr 26 2012 pingou <pingou(a)pingoured.fr> 1.30.0-1
- Update to version 1.30.0
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> 1.28.0-1
- update to 1.28.0
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This update can be installed with the "yum" update program. Use
su -c 'yum update R-qvalue' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years
Fedora 16 Update: R-ROC-1.32.0-1.fc16
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2012-8015
2012-05-18 10:00:54
--------------------------------------------------------------------------------
Name : R-ROC
Product : Fedora 16
Version : 1.32.0
Release : 1.fc16
URL : http://bioconductor.org/packages/release/bioc/html/ROC.html
Summary : Utilities for ROC
Description :
Utilities for ROC with uarray focus.
--------------------------------------------------------------------------------
Update Information:
Update to the new release of bioconductor
--------------------------------------------------------------------------------
ChangeLog:
* Thu Apr 26 2012 pingou <pingou(a)pingoured.fr> 1.32.0-1
- Update to version 1.32.0
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> 1.30.0-1
- update to 1.30.0
--------------------------------------------------------------------------------
This update can be installed with the "yum" update program. Use
su -c 'yum update R-ROC' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years
Fedora 16 Update: R-preprocessCore-1.18.0-1.fc16
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2012-8015
2012-05-18 10:00:54
--------------------------------------------------------------------------------
Name : R-preprocessCore
Product : Fedora 16
Version : 1.18.0
Release : 1.fc16
URL : http://bioconductor.org/packages/release/bioc/html/preprocessCore.html
Summary : A collection of pre-processing functions
Description :
A library of core preprocessing routines
--------------------------------------------------------------------------------
Update Information:
Update to the new release of bioconductor
--------------------------------------------------------------------------------
ChangeLog:
* Thu Apr 26 2012 pingou <pingou(a)pingoured.fr> 1.18.0-1
- Update to version 1.18.0
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> 1.16.0-2
- rebuild for R 2.14.0
* Thu Nov 3 2011 pingou <pingou(a)pingoured.fr> 1.16.0-1
- Update to version 1.16.0
--------------------------------------------------------------------------------
This update can be installed with the "yum" update program. Use
su -c 'yum update R-preprocessCore' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years
Fedora 16 Update: R-multtest-2.12.0-1.fc16
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2012-8015
2012-05-18 10:00:54
--------------------------------------------------------------------------------
Name : R-multtest
Product : Fedora 16
Version : 2.12.0
Release : 1.fc16
URL : http://www.bioconductor.org/packages/release/bioc/html/multtest.html
Summary : Multiple hypothesis testing library from Bioconductor
Description :
Non-parametric bootstrap and permutation resampling-based multiple testing
procedures for controlling the family-wise error rate (FWER), generalized
family-wise error rate (gFWER), tail probability of the proportion of
false positives (TPPFP), and false discovery rate (FDR). Single-step and
step-wise methods are implemented. Tests based on a variety of t- and
F-statistics (including t-statistics based on regression parameters from
linear and survival models) are included. Results are reported in terms
of adjusted p-values, confindence regions and test statistic cutoffs.
The procedures are directly applicable to identifying differentially
expressed genes in DNA microarray experiments.
This Library is a part of the Bioconductor (bioconductor.org) proejct.
--------------------------------------------------------------------------------
Update Information:
Update to the new release of bioconductor
--------------------------------------------------------------------------------
ChangeLog:
* Thu Apr 26 2012 pingou <pingou(a)pingoured.fr> 2.12.0-1
- Update to version 2.12.0
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> 2.10.0-2
- rebuild for R 2.14.0
* Thu Nov 3 2011 pingou <pingou(a)pingoured.fr> 2.10.0-1
- Update to version 2.10.0
--------------------------------------------------------------------------------
This update can be installed with the "yum" update program. Use
su -c 'yum update R-multtest' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years
Fedora 15 Update: primer3-2.3.2-2.fc15
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora Update Notification
FEDORA-2012-6566
2012-04-24 14:13:41
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Name : primer3
Product : Fedora 15
Version : 2.3.2
Release : 2.fc15
URL : http://primer3.sourceforge.net
Summary : PCR primer design tool
Description :
Primer3 is a widely used program for designing PCR primers (PCR =
"Polymerase Chain Reaction"). PCR is an essential and ubiquitous
tool in genetics and molecular biology. Primer3 can also design
hybridization probes and sequencing primers.
PCR is used for many different goals. Consequently, primer3 has
many different input parameters that you control and that tell
primer3 exactly what characteristics make good primers for your goals.
--------------------------------------------------------------------------------
Update Information:
Update to release 2.3.2
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ChangeLog:
* Tue Mar 27 2012 Pierre-Yves Chibon <pingou(a)pingoured.fr> - 2.3.2-2
- Include the primer3_config folder RHBZ#821501
- Move primer3_config from /opt/ where upstream wants it to /etc where I want it
* Tue Mar 27 2012 Pierre-Yves Chibon <pingou(a)pingoured.fr> - 2.3.2-1
- Update to release 2.3.2
* Wed Feb 22 2012 Pierre-Yves Chibon <pingou(a)pingoured.fr> - 2.3.0-1
- Update to release 2.3.0
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #803010 - primer3-2.3.2 is available
https://bugzilla.redhat.com/show_bug.cgi?id=803010
--------------------------------------------------------------------------------
This update can be installed with the "yum" update program. Use
su -c 'yum update primer3' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
12 years