Fedora EPEL 5 Update: nawk-20110810-2.el5
by updates@fedoraproject.org
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Fedora EPEL Update Notification
FEDORA-EPEL-2011-4982
2011-11-15 21:17:22
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Name : nawk
Product : Fedora EPEL 5
Version : 20110810
Release : 2.el5
URL : http://www.cs.princeton.edu/~bwk/btl.mirror/index.html
Summary : "The one true awk" descended from UNIX V7
Description :
This is the version of awk described in "The AWK Programming Language", by Al
Aho, Brian Kernighan, and Peter Weinberger. (Addison-Wesley, 1988, ISBN
0-201-07981-X).
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Update Information:
take out the smp tag in the make
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References:
[ 1 ] Bug #750299 - Segmentation fault (core dumped) when running nawk
https://bugzilla.redhat.com/show_bug.cgi?id=750299
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This update can be installed with the "yum" update programs. Use
su -c 'yum update nawk' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months
[SECURITY] Fedora EPEL 5 Update: ReviewBoard-1.5.7-1.el5
by updates@fedoraproject.org
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Fedora EPEL Update Notification
FEDORA-EPEL-2011-4986
2011-11-15 21:17:46
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Name : ReviewBoard
Product : Fedora EPEL 5
Version : 1.5.7
Release : 1.el5
URL : http://www.review-board.org
Summary : Web-based code review tool
Description :
Review Board is a powerful web-based code review tool that offers
developers an easy way to handle code reviews. It scales well from small
projects to large companies and offers a variety of tools to take much
of the stress and time out of the code review process.
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Update Information:
- New upstream security release 1.5.7
- Security Fixes:
- A script injection vulnerability was discovered in the commenting system. This affected the diff viewer and screenshot pages, and allowed a commenter to break the page and execute JavaScript
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References:
[ 1 ] Bug #754130 - CVE-2011-4312 ReviewBoard: XSS in the commenting system (diff viewer and screenshot pages) [fedora-all]
https://bugzilla.redhat.com/show_bug.cgi?id=754130
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This update can be installed with the "yum" update programs. Use
su -c 'yum update ReviewBoard' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months
Fedora EPEL 4 Update: R-2.14.0-3.el4
by updates@fedoraproject.org
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Fedora EPEL Update Notification
FEDORA-EPEL-2011-4996
2011-11-15 21:18:10
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Name : R
Product : Fedora EPEL 4
Version : 2.14.0
Release : 3.el4
URL : http://www.r-project.org
Summary : A language for data analysis and graphics
Description :
This is a metapackage that provides both core R userspace and
all R development components.
R is a language and environment for statistical computing and graphics.
R is similar to the award-winning S system, which was developed at
Bell Laboratories by John Chambers et al. It provides a wide
variety of statistical and graphical techniques (linear and
nonlinear modelling, statistical tests, time series analysis,
classification, clustering, ...).
R is designed as a true computer language with control-flow
constructions for iteration and alternation, and it allows users to
add additional functionality by defining new functions. For
computationally intensive tasks, C, C++ and Fortran code can be linked
and called at run time.
--------------------------------------------------------------------------------
Update Information:
Update R to 2.14.0. This required a mass rebuild of R packages.
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #751003 - New version of R 2.14.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=751003
--------------------------------------------------------------------------------
This update can be installed with the "yum" update programs. Use
su -c 'yum update R' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months
Fedora EPEL 4 Update: R-DBI-0.2.5-3.el4
by updates@fedoraproject.org
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Fedora EPEL Update Notification
FEDORA-EPEL-2011-4996
2011-11-15 21:18:10
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Name : R-DBI
Product : Fedora EPEL 4
Version : 0.2.5
Release : 3.el4
URL : http://cran.r-project.org/web/packages/DBI/index.html
Summary : Database interface module for R
Description :
A database interface (DBI) definition for communication between R and
relational database management systems.
--------------------------------------------------------------------------------
Update Information:
Update R to 2.14.0. This required a mass rebuild of R packages.
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #751003 - New version of R 2.14.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=751003
--------------------------------------------------------------------------------
This update can be installed with the "yum" update programs. Use
su -c 'yum update R-DBI' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months
Fedora EPEL 4 Update: R-lmtest-0.9.29-1.el4
by updates@fedoraproject.org
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Fedora EPEL Update Notification
FEDORA-EPEL-2011-4996
2011-11-15 21:18:10
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Name : R-lmtest
Product : Fedora EPEL 4
Version : 0.9.29
Release : 1.el4
URL : http://cran.r-project.org/web/packages/lmtest/index.html
Summary : Testing Linear Regression Models for R
Description :
A collection of tests, data sets and examples for diagnostic checking in
linear regression models in R.
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Update Information:
Update R to 2.14.0. This required a mass rebuild of R packages.
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #751003 - New version of R 2.14.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=751003
--------------------------------------------------------------------------------
This update can be installed with the "yum" update programs. Use
su -c 'yum update R-lmtest' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months
Fedora EPEL 4 Update: R-nws-1.7.0.1-3.el4
by updates@fedoraproject.org
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Fedora EPEL Update Notification
FEDORA-EPEL-2011-4996
2011-11-15 21:18:10
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Name : R-nws
Product : Fedora EPEL 4
Version : 1.7.0.1
Release : 3.el4
URL : http://cran.r-project.org/web/packages/nws/index.html
Summary : R functions for NetWorkSpaces and Sleigh
Description :
Provides coordination and parallel execution facilities, as well as limited
cross-language data exchange, using the netWorkSpaces server developed by
REvolution Computing.
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Update Information:
Update R to 2.14.0. This required a mass rebuild of R packages.
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #751003 - New version of R 2.14.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=751003
--------------------------------------------------------------------------------
This update can be installed with the "yum" update programs. Use
su -c 'yum update R-nws' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months
Fedora EPEL 4 Update: R-zoo-1.7.6-2.el4
by updates@fedoraproject.org
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Fedora EPEL Update Notification
FEDORA-EPEL-2011-4996
2011-11-15 21:18:10
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Name : R-zoo
Product : Fedora EPEL 4
Version : 1.7.6
Release : 2.el4
URL : http://cran.r-project.org/web/packages/zoo/index.html
Summary : Z's ordered observations for irregular time series
Description :
An S3 class with methods for totally ordered indexed observations. It is
particularly aimed at irregular time series of numeric vectors/matrices and
factors. zoo's key design goals are independence of a particular index/date/
time class and consistency with with ts and base R by providing methods to
extend standard generics.
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Update Information:
Update R to 2.14.0. This required a mass rebuild of R packages.
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #751003 - New version of R 2.14.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=751003
--------------------------------------------------------------------------------
This update can be installed with the "yum" update programs. Use
su -c 'yum update R-zoo' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months
Fedora EPEL 4 Update: R-qtl-1.21.2-2.el4
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora EPEL Update Notification
FEDORA-EPEL-2011-4996
2011-11-15 21:18:10
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Name : R-qtl
Product : Fedora EPEL 4
Version : 1.21.2
Release : 2.el4
URL : http://www.rqtl.org/
Summary : Tools for analyzing QTL experiments
Description :
R-qtl is an extensible, interactive environment for mapping
quantitative trait loci (QTLs) in experimental crosses. Our goal is to
make complex QTL mapping methods widely accessible and allow users to
focus on modeling rather than computing.
A key component of computational methods for QTL mapping is the hidden
Markov model (HMM) technology for dealing with missing genotype
data. We have implemented the main HMM algorithms, with allowance for
the presence of genotyping errors, for backcrosses, intercrosses, and
phase-known four-way crosses.
The current version of R-qtl includes facilities for estimating
genetic maps, identifying genotyping errors, and performing single-QTL
genome scans and two-QTL, two-dimensional genome scans, by interval
mapping (with the EM algorithm), Haley-Knott regression, and multiple
imputation. All of this may be done in the presence of covariates
(such as sex, age or treatment). One may also fit higher-order QTL
models by multiple imputation and Haley-Knott regression.
--------------------------------------------------------------------------------
Update Information:
Update R to 2.14.0. This required a mass rebuild of R packages.
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #751003 - New version of R 2.14.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=751003
--------------------------------------------------------------------------------
This update can be installed with the "yum" update programs. Use
su -c 'yum update R-qtl' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months
Fedora EPEL 6 Update: python-atfork-0.1.2-1.el6
by updates@fedoraproject.org
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Fedora EPEL Update Notification
FEDORA-EPEL-2011-5054
2011-11-22 20:49:31
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Name : python-atfork
Product : Fedora EPEL 6
Version : 0.1.2
Release : 1.el6
URL : https://code.google.com/p/python-atfork
Summary : Provides an API to register callbacks when forking
Description :
Atfork provides a pthread_atfork() work-a-like API for Python 2.4, 2.5 and 2.6
along with fixers to monkey patch standard library modules at run time to be
safe in programs using both threading and forking.
While mixing threads and forking in a program is generally considered to be a
bad idea it need not be so painful.
A missing API in the Python is an atfork mechanism so that locks can be
acquired and released properly around fork calls. This module adds that. It
also provides monkey patchers that fix the standard library to properly
register callbacks for locks they create.
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Update Information:
Atfork provides a pthread_atfork() work-a-like API for Python 2.4, 2.5 and 2.6 along with fixers to monkey patch standard library modules at run time to be safe in programs using both threading and forking.
--------------------------------------------------------------------------------
This update can be installed with the "yum" update programs. Use
su -c 'yum update python-atfork' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months
Fedora EPEL 6 Update: R-2.14.0-3.el6
by updates@fedoraproject.org
--------------------------------------------------------------------------------
Fedora EPEL Update Notification
FEDORA-EPEL-2011-4983
2011-11-15 21:17:24
--------------------------------------------------------------------------------
Name : R
Product : Fedora EPEL 6
Version : 2.14.0
Release : 3.el6
URL : http://www.r-project.org
Summary : A language for data analysis and graphics
Description :
This is a metapackage that provides both core R userspace and
all R development components.
R is a language and environment for statistical computing and graphics.
R is similar to the award-winning S system, which was developed at
Bell Laboratories by John Chambers et al. It provides a wide
variety of statistical and graphical techniques (linear and
nonlinear modelling, statistical tests, time series analysis,
classification, clustering, ...).
R is designed as a true computer language with control-flow
constructions for iteration and alternation, and it allows users to
add additional functionality by defining new functions. For
computationally intensive tasks, C, C++ and Fortran code can be linked
and called at run time.
--------------------------------------------------------------------------------
Update Information:
Update R to 2.14.0. This required a mass rebuild of R packages.
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #751003 - New version of R 2.14.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=751003
--------------------------------------------------------------------------------
This update can be installed with the "yum" update programs. Use
su -c 'yum update R' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora EPEL GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
--------------------------------------------------------------------------------
11 years, 3 months