The following Fedora 28 Security updates need testing:
Age URL
138
https://bodhi.fedoraproject.org/updates/FEDORA-2018-d510cfd7eb
jgraphx-3.6.0.0-6.fc28
87
https://bodhi.fedoraproject.org/updates/FEDORA-2018-d7aeaa74da
nodejs-brace-expansion-1.1.11-1.fc28
86
https://bodhi.fedoraproject.org/updates/FEDORA-2018-bc073fdc1a
nodejs-atob-2.1.1-1.fc28
79
https://bodhi.fedoraproject.org/updates/FEDORA-2018-9dd3f7c013
unrtf-0.21.9-8.fc28
47
https://bodhi.fedoraproject.org/updates/FEDORA-2018-28e9841baf
docker-latest-1.13.1-37.git9cb56fd.fc28
32
https://bodhi.fedoraproject.org/updates/FEDORA-2018-33fef25ed1
ghc-hakyll-4.10.0.0-3.fc28 pandoc-citeproc-0.12.2.5-4.fc28 ghc-hs-bibutils-6.6.0.0-1.fc28
13
https://bodhi.fedoraproject.org/updates/FEDORA-2018-b1832101b8
tomcat-8.5.32-1.fc28
13
https://bodhi.fedoraproject.org/updates/FEDORA-2018-9565c0bc9a
unixODBC-2.3.7-1.fc28
6
https://bodhi.fedoraproject.org/updates/FEDORA-2018-5da38940e3
dolphin-emu-5.0-24.fc28
5
https://bodhi.fedoraproject.org/updates/FEDORA-2018-77e610115a
mariadb-10.2.17-1.fc28
4
https://bodhi.fedoraproject.org/updates/FEDORA-2018-f2b24ce26e
phpMyAdmin-4.8.3-1.fc28
4
https://bodhi.fedoraproject.org/updates/FEDORA-2018-38bdbafa96
discount-2.2.4-1.fc28
4
https://bodhi.fedoraproject.org/updates/FEDORA-2018-f67fda3db6
community-mysql-5.7.23-1.fc28
The following Fedora 28 Critical Path updates have yet to be approved:
Age URL
13
https://bodhi.fedoraproject.org/updates/FEDORA-2018-6076e25d1e
python-productmd-1.16-1.fc28
10
https://bodhi.fedoraproject.org/updates/FEDORA-2018-a20e0e3c74
pungi-4.1.27-1.fc28
4
https://bodhi.fedoraproject.org/updates/FEDORA-2018-16c78b3d92 rpm-4.14.2-1.fc28
2
https://bodhi.fedoraproject.org/updates/FEDORA-2018-19774fcd66
kernel-tools-4.17.19-200.fc28 kernel-headers-4.17.19-1.fc28 kernel-4.17.19-200.fc28
The following builds have been pushed to Fedora 28 updates-testing
InsightToolkit-4.9.1-8.fc28
R-RColorBrewer-1.1.2-1.fc28
analitza-18.04.3-2.fc28
appmenu-qt5-0.3.0+16.10.20160628.1-10.fc28
armadillo-9.100.5-1.fc28
calibre-3.29.0-1.fc28
container-selinux-2.71-2.git5721d74.fc28
deepin-qt5integration-0.2.8.3-5.fc28
deepin-terminal-3.0.3-1.fc28
deepin-tool-kit-0.3.3-8.fc28
dnscrypt-proxy-gui-1.11.15-2.fc28
dokuwiki-20180422a-1.fc28
dtkwidget-2.0.6.1-1.fc28.2
duplicity-0.7.18.1-1.fc28
fcitx-qt5-1.2.3-2.fc28
filezilla-3.36.0-1.fc28
gammaray-2.9.0-4.fc28
gdal-2.2.4-3.fc28
globus-gsi-proxy-core-8.6-8.fc28
globus-gssapi-gsi-13.8-3.fc28
globus-proxy-utils-6.19-8.fc28
glusterfs-4.1.3-1.fc28
golang-github-Shopify-sarama-1.7.0-0.8.git87ec8d7.fc28
golang-github-git-lfs-netrc-0-0.1.20180827gite0e9ca4.fc28
golang-github-hashicorp-go-immutable-radix-0-0.11.20180612gitaca1bd0.fc28
gsettings-qt-0-0.8.20170715bzr83.fc28.1
kdevelop-5.2.4-1.fc28
kdevelop-php-5.2.4-1.fc28
kdevelop-python-5.2.4-1.py3.fc28
kf5-akonadi-server-18.04.3-2.fc28
kf5-frameworkintegration-5.48.0-2.fc28
kf5-kdeclarative-5.48.0-2.fc28
kf5-kwayland-5.48.0-2.fc28.1
kf5-kxmlgui-5.48.0-3.fc28
kwin-5.13.4-2.fc28
libfm-qt-0.11.2-12.fc28
libqtxdg-2.0.0-13.fc28
lv2-x42-plugins-0.5.0-0.1.20180803.fc28
lxqt-qtplugin-0.11.1-12.fc28
magic-8.2.66-1.fc28
mlpack-2.2.5-8.fc28
mmseq-1.0.8a-27.fc28
mscore-2.2.1-4.fc28
msgpack-3.1.0-1.fc28
myproxy-6.1.30-3.fc28
nghttp2-1.32.1-1.fc28
nordugrid-arc-5.4.2-9.fc28
perl-Storable-3.11-3.fc28
php-myclabs-php-enum-1.6.2-1.fc28
php-symfony-polyfill-1.9.0-1.fc28
plasma-integration-5.13.4-2.fc28
podman-0.8.4-1.git9f9b8cf.fc28
postgresql-10.5-3.fc28
pyotherside-1.5.3-13.fc28
python-beautifulsoup4-4.6.3-1.fc28
python-dns-lexicon-2.7.0-2.fc28
python-doit-0.31.1-1.fc28
python-qt5-5.10.1-3.fc28
pythonqt-3.2-9.fc28
qgnomeplatform-0.4-2.fc28
qstardict-1.3-4.fc28
qt-creator-4.6.2-2.fc28
qt5-5.11.1-3.fc28
qt5-qt3d-5.11.1-2.fc28
qt5-qtbase-5.11.1-7.fc28
qt5-qtcanvas3d-5.11.1-2.fc28
qt5-qtcharts-5.11.1-4.fc28
qt5-qtconnectivity-5.11.1-2.fc28
qt5-qtdatavis3d-5.11.1-1.fc28
qt5-qtdeclarative-5.11.1-3.fc28
qt5-qtdoc-5.11.1-2.fc28
qt5-qtenginio-1.6.2-16.fc28
qt5-qtgamepad-5.11.1-3.fc28
qt5-qtgraphicaleffects-5.11.1-2.fc28
qt5-qtimageformats-5.11.1-2.fc28
qt5-qtlocation-5.11.1-3.fc28
qt5-qtmultimedia-5.11.1-2.fc28
qt5-qtquickcontrols-5.11.1-2.fc28
qt5-qtquickcontrols2-5.11.1-2.fc28
qt5-qtremoteobjects-5.11.1-3.fc28
qt5-qtscript-5.11.1-2.fc28
qt5-qtscxml-5.11.1-3.fc28
qt5-qtsensors-5.11.1-2.fc28
qt5-qtserialbus-5.11.1-3.fc28
qt5-qtserialport-5.11.1-2.fc28
qt5-qtspeech-5.11.1-2.fc28
qt5-qtstyleplugins-5.0.0-27.fc28
qt5-qtsvg-5.11.1-2.fc28
qt5-qttools-5.11.1-2.fc28
qt5-qttranslations-5.11.1-2.fc28
qt5-qtvirtualkeyboard-5.11.1-2.fc28
qt5-qtwayland-5.11.1-2.fc28
qt5-qtwebchannel-5.11.1-2.fc28
qt5-qtwebengine-5.11.1-4.fc28
qt5-qtwebkit-5.212.0-0.27.alpha2.fc28
qt5-qtwebsockets-5.11.1-2.fc28
qt5-qtwebview-5.11.1-3.fc28
qt5-qtx11extras-5.11.1-2.fc28
qt5-qtxmlpatterns-5.11.1-3.fc28
qt5ct-0.35-2.fc28
root-6.14.04-1.fc28
setBfree-0.8.8-1.fc28
skrooge-2.14.0-1.fc28
switchboard-plug-sound-0.1.1-1.fc28
tcpflow-1.5.0-2.fc28
texmaker-5.0.2-6.fc28
ugene-1.31.0-3.fc28
upx-3.95-1.fc28
vim-8.1.328-1.fc28
xdg-desktop-portal-kde-5.13.4-2.fc28
yara-3.8.1-1.fc28
yarock-1.3.1-2.fc28
Details about builds:
================================================================================
InsightToolkit-4.9.1-8.fc28 (FEDORA-2018-9638c0fdcd)
Insight Toolkit library for medical image processing
--------------------------------------------------------------------------------
Update Information:
Just a rebuild for updated libraries.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Feb 7 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 4.9.1-8
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1555479 - InsightToolkit: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555479
--------------------------------------------------------------------------------
================================================================================
R-RColorBrewer-1.1.2-1.fc28 (FEDORA-2018-a263abea3f)
ColorBrewer Palettes
--------------------------------------------------------------------------------
Update Information:
Initial package of RColorBrewer for R
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1622331 - Review Request: R-RColorBrewer - ColorBrewer Palettes
https://bugzilla.redhat.com/show_bug.cgi?id=1622331
--------------------------------------------------------------------------------
================================================================================
analitza-18.04.3-2.fc28 (FEDORA-2018-bea1e0b465)
Library of mathematical features
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 18.04.3-2
- rebuild
--------------------------------------------------------------------------------
================================================================================
appmenu-qt5-0.3.0+16.10.20160628.1-10.fc28 (FEDORA-2018-bea1e0b465)
Support for global DBus-exported application menu in Qt5
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Thu Jul 12 2018 Fedora Release Engineering <releng(a)fedoraproject.org> -
0.3.0+16.10.20160628.1-10
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
armadillo-9.100.5-1.fc28 (FEDORA-2018-48da79b853)
Fast C++ matrix library with syntax similar to MATLAB and Octave
--------------------------------------------------------------------------------
Update Information:
Update to the latest stable version of armadillo. The changes are: * faster
handling of symmetric/hermitian positive definite matrices by `solve()` *
faster handling of `inv_sympd()` in compound expressions * added
`.is_symmetric()` * added `.is_hermitian()` * expanded `spsolve()` to
optionally allow keeping solutions of systems singular to working precision *
new configuration options `ARMA_OPTIMISE_SOLVE_BAND` and
`ARMA_OPTIMISE_SOLVE_SYMPD` * smarter use of the element cache in sparse
matrices
--------------------------------------------------------------------------------
ChangeLog:
* Fri Aug 17 2018 Jos�� Matos <jamatos(a)fedoraproject.org> - 9.100.5-1
- update to 9.100.5
- add white lines to improve spec file readability
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1553481 - FTBFS with GCC 8 (F28, Rawhide)
https://bugzilla.redhat.com/show_bug.cgi?id=1553481
[ 2 ] Bug #1616257 - armadillo-9.100.5 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1616257
--------------------------------------------------------------------------------
================================================================================
calibre-3.29.0-1.fc28 (FEDORA-2018-bea1e0b465)
E-book converter and library manager
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Tue Aug 14 2018 Kevin Fenzi <kevin(a)scrye.com> - 3.29.0-1
- Update to 3.29.0. Fixes bug #1614778
* Tue Jul 31 2018 Florian Weimer <fweimer(a)redhat.com> - 3.28.0-3
- Rebuild with fixed binutils
* Fri Jul 27 2018 Igor Gnatenko <ignatenkobrain(a)fedoraproject.org> - 3.28.0-2
- Rebuild for new binutils
* Thu Jul 26 2018 Kevin Fenzi <kevin(a)scrye.com> - 3.28.0-1
- Update to 3.28.0. Fixes bug #1605186
* Thu Jul 26 2018 Zbigniew J��drzejewski-Szmek <zbyszek(a)in.waw.pl> - 3.27.1-5
- Use versioned python macros
- Do explicit byte compilation to conform to new guidelines
* Thu Jul 12 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 3.27.1-4
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jul 11 2018 Sandro Mani <manisandro(a)gmail.com> - 3.27.1-3
- Rebuild (podofo)
* Tue Jul 10 2018 Pete Walter <pwalter(a)fedoraproject.org> - 3.27.1-2
- Rebuild for ICU 62
* Sat Jul 7 2018 Zbigniew J��drzejewski-Szmek <zbyszek(a)in.waw.pl> - 3.27.1-1
- Update to 3.27.1. Fixes bug #1598761
* Thu Jun 21 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 3.26.1-2
- rebuild (qt5)
* Fri Jun 15 2018 Kevin Fenzi <kevin(a)scrye.com> - 3.26.1-1
- Update to 3.26.1. Fixes bug #1591735
* Sun Jun 3 2018 Kevin Fenzi <kevin(a)scrye.com> - 3.25.0-1
- Update to 3.25.0. Fixes bug #1585171
* Wed May 30 2018 Kevin Fenzi <kevin(a)scrye.com> - 3.24.2-1
- Update to 3.24.2.
* Tue May 29 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 3.23.0-2
- rebuild (qt5)
* Fri May 4 2018 Kevin Fenzi <kevin(a)scrye.com> - 3.23.0-1
- Update to 3.23.0. Fixes bug #1574953
* Mon Apr 30 2018 Pete Walter <pwalter(a)fedoraproject.org> - 3.22.1-2
- Rebuild for ICU 61.1
* Fri Apr 20 2018 Kevin Fenzi <kevin(a)scrye.com> - 3.22.1-1
- Update to 3.22.1. Fixes bug #1569983
* Sat Apr 7 2018 Kevin Fenzi <kevin(a)scrye.com> - 3.21.0-1
- Update to 3.21.0. Fixes bug #1564477
* Fri Mar 23 2018 Kevin Fenzi <kevin(a)scrye.com> - 3.20.0-1
- Update to 3.20.0. Fixes bug #1559848
--------------------------------------------------------------------------------
================================================================================
container-selinux-2.71-2.git5721d74.fc28 (FEDORA-2018-0cd1b5be98)
SELinux policies for container runtimes
--------------------------------------------------------------------------------
Update Information:
Don't error out if /var/lib/containers does not exist.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Dan Walsh <dwalsh(a)fedoraproject.org> - 2.71-2
- Fix restorecon to not error on missing directory
* Wed Aug 22 2018 Dan Walsh <dwalsh(a)fedoraproject.org> - 2.71-1
- Allow unconfined_r to transition to system_r over container_runtime_exec_t
- Allow unconfined_t to transition to container_runtime_t over container_runtime_exec_t
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1622539 - Scriptlet failure in container-selinux
https://bugzilla.redhat.com/show_bug.cgi?id=1622539
[ 2 ] Bug #1622416 - [container-selinux] workstation network installation aborts because
of error in POSTIN scriptlet
https://bugzilla.redhat.com/show_bug.cgi?id=1622416
--------------------------------------------------------------------------------
================================================================================
deepin-qt5integration-0.2.8.3-5.fc28 (FEDORA-2018-bea1e0b465)
Qt platform theme integration plugins for DDE
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 0.2.8.3-5
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
deepin-terminal-3.0.3-1.fc28 (FEDORA-2018-8b35bdb9d2)
Default terminal emulation application for Deepin
--------------------------------------------------------------------------------
Update Information:
Update to 3.0.3
--------------------------------------------------------------------------------
ChangeLog:
* Sat Aug 25 2018 mosquito <sensor.wen(a)gmail.com> - 3.0.3-1
- Update to 3.0.3
* Fri Jul 27 2018 mosquito <sensor.wen(a)gmail.com> - 3.0.1-1
- Update to 3.0.1
* Thu Jul 12 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 2.9.2-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
deepin-tool-kit-0.3.3-8.fc28 (FEDORA-2018-bea1e0b465)
Base development tool of all C++/Qt Developer work on Deepin
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 0.3.3-8
- rebuild (qt5), use %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
dnscrypt-proxy-gui-1.11.15-2.fc28 (FEDORA-2018-bea1e0b465)
GUI wrapper for dnscrypt-proxy
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1.11.15-2
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
dokuwiki-20180422a-1.fc28 (FEDORA-2018-be9f4838dd)
Standards compliant simple to use wiki
--------------------------------------------------------------------------------
Update Information:
Update to upstream version 2018-04-22a
--------------------------------------------------------------------------------
ChangeLog:
* Sat Aug 25 2018 Artur Iwicki <fedora(a)svgames.pl> - 20180422a-1
- Change the versioning scheme
* Mon Aug 20 2018 Artur Iwicki <fedora(a)svgames.pl> - 0-0.33.20180422a
- Remove the "Group:" tag (no longer used in Fedora)
- Replace the hand-written %releasetag with one generated from %releasenum
* Fri Jul 13 2018 Peter 'Pessoft' Kol��nek <fedora(a)pessoft.com> -
0-0.32.20180422a
- Update to the latest stable upstream 2018-04-22a "Greebo" (#1390291:
CVE-2016-7964, CVE-2016-7965, CVE-2017-12583, CVE-2017-12979, CVE-2017-12980,
CVE-2017-18123)
- Fix missing vendor directory issue (#1372948)
- Fix Apache config file for access to conf and bin
- Replace more bundled code in vendor directory with Fedora packages (lesserphp,
random_compat, phpseclib, simplepie)
- Fix source to HTTPS
* Fri Mar 30 2018 Iryna Shcherbina <ishcherb(a)redhat.com> - 0-0.31.20150810a
- Update Python 2 dependency declarations to new packaging standards
(See
https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3)
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1390291 - CVE-2016-7964 CVE-2016-7965 CVE-2017-12583 CVE-2017-12979
CVE-2017-12980 CVE-2017-18123 dokuwiki: Various flaws [fedora-all]
https://bugzilla.redhat.com/show_bug.cgi?id=1390291
[ 2 ] Bug #1372948 - Error 500 due to missing vendor directory
/usr/share/dokuwiki/vendor
https://bugzilla.redhat.com/show_bug.cgi?id=1372948
--------------------------------------------------------------------------------
================================================================================
dtkwidget-2.0.6.1-1.fc28.2 (FEDORA-2018-bea1e0b465)
Deepin tool kit widget modules
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.0.6.1-1.2
- BR: qt5-qtbase-private-devel
* Sun Jul 15 2018 Zamir SUN <zsun(a)fedoraproject.org> - 2.0.6.1-1.fc28.1
- Bump version to build for Fedora 28
* Tue Feb 20 2018 mosquito <sensor.wen(a)gmail.com> - 2.0.6.1-1
- Update to 2.0.6.1
--------------------------------------------------------------------------------
================================================================================
duplicity-0.7.18.1-1.fc28 (FEDORA-2018-a29fc7839b)
Encrypted bandwidth-efficient backup using rsync algorithm
--------------------------------------------------------------------------------
Update Information:
https://launchpad.net/duplicity/+announcement/15047
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Gwyn Ciesla <limburgher(a)gmail.com> - 0.7.18.1-1
- Patch for crash.
* Wed Aug 22 2018 Gwyn Ciesla <limburgher(a)gmail.com> - 0.7.18-1
- 0.7.18.
* Thu Jul 12 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 0.7.17-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1622232 - New crash with 0.7.18
https://bugzilla.redhat.com/show_bug.cgi?id=1622232
--------------------------------------------------------------------------------
================================================================================
fcitx-qt5-1.2.3-2.fc28 (FEDORA-2018-bea1e0b465)
Fcitx IM module for Qt5
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Thu Jun 21 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1.2.3-2
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
filezilla-3.36.0-1.fc28 (FEDORA-2018-e1bc79d070)
FTP, FTPS and SFTP client
--------------------------------------------------------------------------------
Update Information:
3.36.0
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Gwyn Ciesla <limburgher(a)gmail.com> - 3.36.0-1
- 3.36.0 final
* Mon Aug 20 2018 Gwyn Ciesla <limburgher(a)gmail.com> - 3.36.0-0.rc1
- 3.36.0 rc1
--------------------------------------------------------------------------------
================================================================================
gammaray-2.9.0-4.fc28 (FEDORA-2018-bea1e0b465)
A tool for examining internals of Qt applications
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Thu Aug 23 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.9.0-4
- drop mkspecs hack causing FTBFS
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 2.9.0-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Thu Jun 21 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.9.0-2
- rebuild (qt5)
* Sat Jun 2 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.9.0-1
- gammayray-2.9.0
- make qt4 support optional (off for now)
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.8.1-9
- rebuild (qt5)
* Thu Mar 15 2018 Iryna Shcherbina <ishcherb(a)redhat.com> - 2.8.1-8
- Update Python 2 dependency declarations to new packaging standards
(See
https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3)
--------------------------------------------------------------------------------
================================================================================
gdal-2.2.4-3.fc28 (FEDORA-2018-48da79b853)
GIS file format library
--------------------------------------------------------------------------------
Update Information:
Update to the latest stable version of armadillo. The changes are: * faster
handling of symmetric/hermitian positive definite matrices by `solve()` *
faster handling of `inv_sympd()` in compound expressions * added
`.is_symmetric()` * added `.is_hermitian()` * expanded `spsolve()` to
optionally allow keeping solutions of systems singular to working precision *
new configuration options `ARMA_OPTIMISE_SOLVE_BAND` and
`ARMA_OPTIMISE_SOLVE_SYMPD` * smarter use of the element cache in sparse
matrices
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Jos�� Ab��lio Matos <jamatos(a)fc.up.pt> - 2.2.4-3
- rebuild for armadillo soname bump
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1553481 - FTBFS with GCC 8 (F28, Rawhide)
https://bugzilla.redhat.com/show_bug.cgi?id=1553481
[ 2 ] Bug #1616257 - armadillo-9.100.5 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1616257
--------------------------------------------------------------------------------
================================================================================
globus-gsi-proxy-core-8.6-8.fc28 (FEDORA-2018-b00f50fa3b)
Globus Toolkit - Globus GSI Proxy Core Library
--------------------------------------------------------------------------------
Update Information:
Increase default proxy key size to 2048 bits. Avoid TLS 1.3 in globus-gssapi-
gsi - needs porting.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Aug 26 2018 Mattias Ellert <mattias.ellert(a)physics.uu.se> - 8.6-8
- Increase default proxy key size to 2048 bits
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 8.6-7
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
globus-gssapi-gsi-13.8-3.fc28 (FEDORA-2018-b00f50fa3b)
Globus Toolkit - GSSAPI library
--------------------------------------------------------------------------------
Update Information:
Increase default proxy key size to 2048 bits. Avoid TLS 1.3 in globus-gssapi-
gsi - needs porting.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Aug 26 2018 Mattias Ellert <mattias.ellert(a)physics.uu.se> - 13.8-3
- Avoid TLS 1.3 - needs porting
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 13.8-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
globus-proxy-utils-6.19-8.fc28 (FEDORA-2018-b00f50fa3b)
Globus Toolkit - Globus GSI Proxy Utility Programs
--------------------------------------------------------------------------------
Update Information:
Increase default proxy key size to 2048 bits. Avoid TLS 1.3 in globus-gssapi-
gsi - needs porting.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Aug 26 2018 Mattias Ellert <mattias.ellert(a)physics.uu.se> - 6.19-8
- Increase default proxy key size to 2048 bits
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 6.19-7
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
glusterfs-4.1.3-1.fc28 (FEDORA-2018-93b269fa36)
Distributed File System
--------------------------------------------------------------------------------
Update Information:
4.1.3 GA
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Kaleb S. KEITHLEY <kkeithle[at]redhat.com> - 4.1.3-1
- 4.1.3 GA
--------------------------------------------------------------------------------
================================================================================
golang-github-Shopify-sarama-1.7.0-0.8.git87ec8d7.fc28 (FEDORA-2018-7355209f88)
Sarama is a Go library for Apache Kafka 0.8 and 0.9
--------------------------------------------------------------------------------
Update Information:
Disable the failing tests
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Jan Chaloupka <jchaloup(a)redhat.com> - 1.7.0-0.8.git87ec8d7
- Disable tests
resolves: #1555780
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> -
1.7.0-0.7.git87ec8d7
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Feb 7 2018 Fedora Release Engineering <releng(a)fedoraproject.org> -
1.7.0-0.6.git87ec8d7
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Wed Aug 2 2017 Fedora Release Engineering <releng(a)fedoraproject.org> -
1.7.0-0.5.git87ec8d7
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
* Wed Jul 26 2017 Fedora Release Engineering <releng(a)fedoraproject.org> -
1.7.0-0.4.git87ec8d7
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Fri Feb 10 2017 Fedora Release Engineering <releng(a)fedoraproject.org> -
1.7.0-0.3.git87ec8d7
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1604187 - golang-github-Shopify-sarama: FTBFS in Fedora rawhide
https://bugzilla.redhat.com/show_bug.cgi?id=1604187
[ 2 ] Bug #1555780 - golang-github-Shopify-sarama: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555780
--------------------------------------------------------------------------------
================================================================================
golang-github-git-lfs-netrc-0-0.1.20180827gite0e9ca4.fc28 (FEDORA-2018-8816410875)
A Golang package for reading and writing netrc files
--------------------------------------------------------------------------------
Update Information:
Initial package for Fedora
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1584973 - Review Request: golang-github-git-lfs-netrc - A Golang package for
reading and writing netrc files
https://bugzilla.redhat.com/show_bug.cgi?id=1584973
--------------------------------------------------------------------------------
================================================================================
golang-github-hashicorp-go-immutable-radix-0-0.11.20180612gitaca1bd0.fc28
(FEDORA-2018-2001b0b886)
An immutable radix tree implementation in Golang
--------------------------------------------------------------------------------
Update Information:
Rebuild
--------------------------------------------------------------------------------
ChangeLog:
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> -
Forge-specific packaging variables
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 12 2018 Jan Chaloupka <jchaloup(a)redhat.com> - 0-0.10.gitaca1bd0
- Upload glide files
* Wed Feb 28 2018 Jan Chaloupka <jchaloup(a)redhat.com> - 0-0.9.20151012gitaca1bd0
- Autogenerate some parts using the new macros
* Wed Feb 7 2018 Fedora Release Engineering <releng(a)fedoraproject.org> -
0-0.8.gitaca1bd0
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1555805 - golang-github-hashicorp-go-immutable-radix: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555805
--------------------------------------------------------------------------------
================================================================================
gsettings-qt-0-0.8.20170715bzr83.fc28.1 (FEDORA-2018-bea1e0b465)
Qt/QML bindings for GSettings
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
================================================================================
kdevelop-5.2.4-1.fc28 (FEDORA-2018-bf0cdec596)
Integrated Development Environment for C++/C
--------------------------------------------------------------------------------
Update Information:
KDevelop 5.2.4 release. See
https://www.kdevelop.org/news/kdevelop-524-released
for more information.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Jan Grulich <jgrulich(a)redhat.com> - 5.2.4-1
- 5.2.4
* Thu Aug 16 2018 Than Ngo <than(a)redhat.com> - 5.2.3-4
- fixed #1405880, prefer qmake-qt5
- fixed #1518465, prefer bash and drop zsh dependency
* Mon Jul 23 2018 Than Ngo <than(a)redhat.com> - 5.2.3-3
- fixed FTBFS
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 9:5.2.3-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
kdevelop-php-5.2.4-1.fc28 (FEDORA-2018-bf0cdec596)
Php language and documentation plugins for KDevelop
--------------------------------------------------------------------------------
Update Information:
KDevelop 5.2.4 release. See
https://www.kdevelop.org/news/kdevelop-524-released
for more information.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Jan Grulich <jgrulich(a)redhat.com> - 5.2.4-1
- 5.2.4
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.2.3-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
kdevelop-python-5.2.4-1.py3.fc28 (FEDORA-2018-bf0cdec596)
Python 3 Plugin for KDevelop
--------------------------------------------------------------------------------
Update Information:
KDevelop 5.2.4 release. See
https://www.kdevelop.org/news/kdevelop-524-released
for more information.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Jan Grulich <jgrulich(a)redhat.com> - 5.2.4-1.py3
- 5.2.4
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> -
5.2.3-4.py3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Thu Jul 12 2018 Sandro Mani <manisandro(a)gmail.com> - 5.2.3-3.py3
- Fix FTBFS due to syntax error due to async being a reserved keyword in python3.7
* Tue Jun 19 2018 Miro Hron��ok <mhroncok(a)redhat.com> - 5.2.3-2.py3
- Rebuilt for Python 3.7
--------------------------------------------------------------------------------
================================================================================
kf5-akonadi-server-18.04.3-2.fc28 (FEDORA-2018-bea1e0b465)
PIM Storage Service
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 18.04.3-2
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
kf5-frameworkintegration-5.48.0-2.fc28 (FEDORA-2018-bea1e0b465)
KDE Frameworks 5 Tier 4 workspace and cross-framework integration plugins
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.48.0-2
- branch rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
kf5-kdeclarative-5.48.0-2.fc28 (FEDORA-2018-bea1e0b465)
KDE Frameworks 5 Tier 3 addon for Qt declarative
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.48.0-2
- branch rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
kf5-kwayland-5.48.0-2.fc28.1 (FEDORA-2018-bea1e0b465)
KDE Frameworks 5 library that wraps Client and Server Wayland libraries
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.48.0-3
- branch rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
kf5-kxmlgui-5.48.0-3.fc28 (FEDORA-2018-bea1e0b465)
KDE Frameworks 5 Tier 3 solution for user-configurable main windows
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.48.0-3
- branch rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
kwin-5.13.4-2.fc28 (FEDORA-2018-bea1e0b465)
KDE Window manager
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Fri Aug 24 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.13.4-2
- rebuild
--------------------------------------------------------------------------------
================================================================================
libfm-qt-0.11.2-12.fc28 (FEDORA-2018-bea1e0b465)
Companion library for PCManFM
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 0.11.2-12
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
libqtxdg-2.0.0-13.fc28 (FEDORA-2018-bea1e0b465)
QtXdg, a Qt5 implementation of XDG standards
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.0.0-13
- rebuild (qt5)
* Wed Mar 7 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.0.0-12
- .spec cleanup, BR: gcc-c++, use %license %make_build
--------------------------------------------------------------------------------
================================================================================
lv2-x42-plugins-0.5.0-0.1.20180803.fc28 (FEDORA-2018-b0884d5ca5)
A number of LV2 plugins
--------------------------------------------------------------------------------
Update Information:
Update to 20180803
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Guido Aulisi <guido.aulisi(a)gmail.com> - 0.5.0-0.1.20180803
- Update to 20180803
- New dpl plugin
--------------------------------------------------------------------------------
================================================================================
lxqt-qtplugin-0.11.1-12.fc28 (FEDORA-2018-bea1e0b465)
Qt plugin framework for LXQt Desktop Suite
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 0.11.1-12
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
magic-8.2.66-1.fc28 (FEDORA-2018-92769c3e89)
A very capable VLSI layout tool
--------------------------------------------------------------------------------
Update Information:
New version 8.2.66 is released.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Aug 24 2019 Mamoru TASAKA <mtasaka(a)fedoraproject.org> - 8.2.66-1
- 8.2.66
* Tue Jul 31 2018 Florian Weimer <fweimer(a)redhat.com> - 8.2.65-2
- Rebuild with fixed binutils
--------------------------------------------------------------------------------
================================================================================
mlpack-2.2.5-8.fc28 (FEDORA-2018-48da79b853)
Scalable, fast C++ machine learning library
--------------------------------------------------------------------------------
Update Information:
Update to the latest stable version of armadillo. The changes are: * faster
handling of symmetric/hermitian positive definite matrices by `solve()` *
faster handling of `inv_sympd()` in compound expressions * added
`.is_symmetric()` * added `.is_hermitian()` * expanded `spsolve()` to
optionally allow keeping solutions of systems singular to working precision *
new configuration options `ARMA_OPTIMISE_SOLVE_BAND` and
`ARMA_OPTIMISE_SOLVE_SYMPD` * smarter use of the element cache in sparse
matrices
--------------------------------------------------------------------------------
ChangeLog:
* Fri Aug 17 2018 Jos�� Ab��lio Matos <jamatos(a)fc.up.pt> - 2.2.5-8
- rebuild for armadillo soname bump
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 2.2.5-7
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1553481 - FTBFS with GCC 8 (F28, Rawhide)
https://bugzilla.redhat.com/show_bug.cgi?id=1553481
[ 2 ] Bug #1616257 - armadillo-9.100.5 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1616257
--------------------------------------------------------------------------------
================================================================================
mmseq-1.0.8a-27.fc28 (FEDORA-2018-48da79b853)
Haplotype and isoform specific expression estimation for RNA-seq
--------------------------------------------------------------------------------
Update Information:
Update to the latest stable version of armadillo. The changes are: * faster
handling of symmetric/hermitian positive definite matrices by `solve()` *
faster handling of `inv_sympd()` in compound expressions * added
`.is_symmetric()` * added `.is_hermitian()` * expanded `spsolve()` to
optionally allow keeping solutions of systems singular to working precision *
new configuration options `ARMA_OPTIMISE_SOLVE_BAND` and
`ARMA_OPTIMISE_SOLVE_SYMPD` * smarter use of the element cache in sparse
matrices
--------------------------------------------------------------------------------
ChangeLog:
* Fri Aug 17 2018 Jos�� Ab��lio Matos <jamatos(a)fc.up.pt> - 1.0.8a-27
- rebuild for armadillo soname bump
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 1.0.8a-26
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Thu Feb 8 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 1.0.8a-25
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1553481 - FTBFS with GCC 8 (F28, Rawhide)
https://bugzilla.redhat.com/show_bug.cgi?id=1553481
[ 2 ] Bug #1616257 - armadillo-9.100.5 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1616257
--------------------------------------------------------------------------------
================================================================================
mscore-2.2.1-4.fc28 (FEDORA-2018-bea1e0b465)
Music Composition & Notation Software
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Thu Jun 21 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.2.1-4
- rebuild (qt5)
* Thu May 31 2018 Orcan Ogetbil <oget[DOT]fedora[AT]gmail[DOT]com> - 2.2.1-3
- Fix missing include for qt >= 5.11 (RHBZ#1584834)
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.2.1-2
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
msgpack-3.1.0-1.fc28 (FEDORA-2018-269e7fa6a4)
Binary-based efficient object serialization library
--------------------------------------------------------------------------------
Update Information:
Update to the new upstream release:
https://github.com/msgpack/msgpack-c/releases/tag/cpp-3.1.0
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Daiki Ueno <dueno(a)redhat.com> - 3.1.0-1
- new upstream release
- cmake configuration files no longer rely on nonexistent static libraries
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 3.0.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1596164 - msgpack cmake configuration files not working
https://bugzilla.redhat.com/show_bug.cgi?id=1596164
--------------------------------------------------------------------------------
================================================================================
myproxy-6.1.30-3.fc28 (FEDORA-2018-b00f50fa3b)
Manage X.509 Public Key Infrastructure (PKI) security credentials
--------------------------------------------------------------------------------
Update Information:
Increase default proxy key size to 2048 bits. Avoid TLS 1.3 in globus-gssapi-
gsi - needs porting.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Aug 26 2018 Mattias Ellert <mattias.ellert(a)physics.uu.se> - 6.1.30-3
- Use 2048 bit CA key for myproxy tests
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 6.1.30-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
nghttp2-1.32.1-1.fc28 (FEDORA-2018-3297fa49e1)
Experimental HTTP/2 client, server and proxy
--------------------------------------------------------------------------------
Update Information:
- update to the latest upstream bugfix release
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Kamil Dudka <kdudka(a)redhat.com> 1.32.1-1
- update to the latest upstream bugfix release
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 1.32.0-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
nordugrid-arc-5.4.2-9.fc28 (FEDORA-2018-c7d55189fc)
Advanced Resource Connector Grid Middleware
--------------------------------------------------------------------------------
Update Information:
Backported bugfixes from upstream.
--------------------------------------------------------------------------------
ChangeLog:
* Fri Aug 24 2018 Mattias Ellert <mattias.ellert(a)physics.uu.se> - 5.4.2-9
- Various bugfixes from upstream
- Respect s3 port number (nordugrid bugz 3701)
- Adding support for RTE arguments in xRSL (nordugrid bugz 3705)
- Small fix for Perl warnings (nordugrid bugz 3074)
- Add empty Default-Start LSB keyword to avoid warnings
- Fix shebangs to request python2
- Use consistent 'unused' python shebangs
- Handle twisted API change in v18.4 (nordugrid bugz 3733)
- Run sub-process with the same python executable as main process
- Relax FQDN demands in condor history file (GGUS #134645)
- Fix -h processing in options parser (nordugrid bugz 3725)
* Mon Jul 16 2018 Mattias Ellert <mattias.ellert(a)physics.uu.se> - 5.4.2-8
- Explicitly request --with-python=python2
- Fix pylint error with new pylint
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.4.2-7
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Miro Hron��ok <mhroncok(a)redhat.com> - 5.4.2-6
- Rebuilt for Python 3.7
--------------------------------------------------------------------------------
================================================================================
perl-Storable-3.11-3.fc28 (FEDORA-2018-1c7bb93f9b)
Persistence for Perl data structures
--------------------------------------------------------------------------------
Update Information:
This release fixes a recursion check that miscalculated the recursion depth.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Petr Pisar <ppisar(a)redhat.com> - 1:3.11-3
- Fix recursion check (RT#133326)
--------------------------------------------------------------------------------
================================================================================
php-myclabs-php-enum-1.6.2-1.fc28 (FEDORA-2018-cd2d36e2fe)
PHP Enum implementation
--------------------------------------------------------------------------------
Update Information:
**Version 1.6.2** * Performance optimizations
--------------------------------------------------------------------------------
ChangeLog:
* Fri Aug 24 2018 Remi Collet <remi(a)remirepo.net> - 1.6.2-1
- update to 1.6.2
--------------------------------------------------------------------------------
================================================================================
php-symfony-polyfill-1.9.0-1.fc28 (FEDORA-2018-4c2b0845f0)
Symfony polyfills backporting features to lower PHP versions
--------------------------------------------------------------------------------
Update Information:
**Version v1.9.0** * added polyfill for `hrtime()` * added polyfills for
`array_key_first()` and `array_key_last()` * fixed infinite loop in `iconv()`
polyfill when using translit mode * fixed converting to title case with
mbstring polyfill
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Remi Collet <remi(a)remirepo.net> - 1.9.0-1
- update to 1.9.0
* Mon Jul 16 2018 Remi Collet <remi(a)remirepo.net> - 1.8.0-3
- raise dependency on PHP 7 and ignore dependencies on
ircmaxell/password-compat and paragonie/random_compat
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 1.8.0-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
plasma-integration-5.13.4-2.fc28 (FEDORA-2018-bea1e0b465)
Qt Platform Theme integration plugin for Plasma
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.13.4-2
- rebuild
--------------------------------------------------------------------------------
================================================================================
podman-0.8.4-1.git9f9b8cf.fc28 (FEDORA-2018-f1f3b41ec3)
Manage Pods, Containers and Container Images
--------------------------------------------------------------------------------
Update Information:
Bump for new version.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Aug 26 2018 Dan Walsh <dwalsh(a)redhat.com> - 0.8.4-1.git9f9b8c
- Upstream 0.8.4 release
* Wed Aug 22 2018 Lokesh Mandvekar <lsm5(a)fedoraproject.org> - 0.8.3-4.git9d09a4
- Resolves: #1619411 - python3-podman requires python3-psutil
* Wed Aug 22 2018 Lokesh Mandvekar <lsm5(a)fedoraproject.org> - 0.8.3-3.git9d09a4
- podman-docker conflicts with moby-engine
- podman requires containernetworking-plugins, nftables
- use default %gobuild definition
* Tue Aug 21 2018 baude <bbaude(a)redhat.com> - 0.8.3-2.git9d09a4
- Remove requires buildah
--------------------------------------------------------------------------------
================================================================================
postgresql-10.5-3.fc28 (FEDORA-2018-8870ed56fa)
PostgreSQL client programs
--------------------------------------------------------------------------------
Update Information:
devel subpackage provides libpq-devel, postgresql-server-devel and libecpg-devel
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Pavel Raiskup <praiskup(a)redhat.com> - 10.5-3
- devel subpackage provides postgresql-server-devel and libecpg-devel
(first step for rhbz#1618698)
* Mon Aug 27 2018 Pavel Raiskup <praiskup(a)redhat.com> - 10.5-2
- packaging cleanup
- devel subpackage to provide libpq-devel (first step for rhbz#1618698)
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1618698 - [modularity] drop postgresql-libs - create libpq.spec and
libecpg.spec instead
https://bugzilla.redhat.com/show_bug.cgi?id=1618698
--------------------------------------------------------------------------------
================================================================================
pyotherside-1.5.3-13.fc28 (FEDORA-2018-bea1e0b465)
Asynchronous Python 3 Bindings for Qt 5
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1.5.3-13
- better exclude fix
* Tue Jul 17 2018 Martin Kolman <mkolman(a)redhat.com> - 1.5.3-12
- fix exclude for qtquicktests
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 1.5.3-11
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Mon Jul 2 2018 Miro Hron��ok <mhroncok(a)redhat.com> - 1.5.3-10
- Rebuilt for Python 3.7
* Thu Jun 21 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1.5.3-9
- rebuild (qt5)
* Tue Jun 19 2018 Miro Hron��ok <mhroncok(a)redhat.com> - 1.5.3-8
- Rebuilt for Python 3.7
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1.5.3-7
- rebuild (qt)
- use %make_build %license
--------------------------------------------------------------------------------
================================================================================
python-beautifulsoup4-4.6.3-1.fc28 (FEDORA-2018-99112fc1a0)
HTML/XML parser for quick-turnaround applications like screen-scraping
--------------------------------------------------------------------------------
Update Information:
Update to latest upstream release beautifulsoup 4.6.3.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Terje Rosten <terje.rosten(a)ntnu.no> - 4.6.3-1
- 4.6.3
* Mon Jul 30 2018 Terje Rosten <terje.rosten(a)ntnu.no> - 4.6.1-1
- 4.6.1
* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 4.6.0-8
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Sun Jun 17 2018 Miro Hron��ok <mhroncok(a)redhat.com> - 4.6.0-7
- Rebuilt for Python 3.7
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1615177 - python-beautifulsoup4-4.6.3 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1615177
--------------------------------------------------------------------------------
================================================================================
python-dns-lexicon-2.7.0-2.fc28 (FEDORA-2018-0574efb8ca)
Manipulate DNS records on various DNS providers in a standardized/agnostic way
--------------------------------------------------------------------------------
Update Information:
Add missing dependency on python-cryptography.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Eli Young <elyscape(a)gmail.com> - 2.7.0-2
- Add dependency on python-cryptography (#1622418)
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1622418 - python-dns-lexicon should require python-cryptography
https://bugzilla.redhat.com/show_bug.cgi?id=1622418
--------------------------------------------------------------------------------
================================================================================
python-doit-0.31.1-1.fc28 (FEDORA-2018-64a482209d)
Automation Tool
--------------------------------------------------------------------------------
Update Information:
Update to the latest stable release. The changes since the last version, mostly
bug fixes with some enhancements, are described in the `CHANGES` file.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Jos�� Matos <jamatos(a)fedoraproject.org> - 0.31.1-1
- update to 0.31.1
- remove bundled egg-info
- identify the license
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 0.30.3-5
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Miro Hron��ok <mhroncok(a)redhat.com> - 0.30.3-4
- Rebuilt for Python 3.7
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1548836 - python-doit-0.31.1 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1548836
--------------------------------------------------------------------------------
================================================================================
python-qt5-5.10.1-3.fc28 (FEDORA-2018-bea1e0b465)
PyQt5 is Python bindings for Qt5
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.10.1-3
- branch rebuild (qt5)
- qt511.patch
* Tue Mar 20 2018 Zbigniew J��drzejewski-Szmek <zbyszek(a)in.waw.pl> - 5.10.1-2
- Add missing %python_provide macros
- Rename python2 packages to python2-*
* Tue Mar 6 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.10.1-1
- 5.10.1, use %make_build
* Sat Mar 3 2018 S��rgio Basto <sergio(a)serjux.com> - 5.10-4
- Enable python3 on epel7
--------------------------------------------------------------------------------
================================================================================
pythonqt-3.2-9.fc28 (FEDORA-2018-bea1e0b465)
Lightweight script binding of the Qt framework to the Python language
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Mon May 28 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 3.2-9
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
qgnomeplatform-0.4-2.fc28 (FEDORA-2018-bea1e0b465)
Qt Platform Theme aimed to accommodate Gnome settings
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Fri Aug 24 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 0.4-2
- rebuild
--------------------------------------------------------------------------------
================================================================================
qstardict-1.3-4.fc28 (FEDORA-2018-bea1e0b465)
StarDict clone written using Qt
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1.3-4
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
qt-creator-4.6.2-2.fc28 (FEDORA-2018-bea1e0b465)
Cross-platform IDE for Qt
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Fri Aug 24 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 4.6.2-2
- branch rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
qt5-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465)
Qt5 meta package
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Fri Jun 29 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-2
- %_qt5_prefix=%_prefix (was %_libdir/qt5}
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sat Jun 2 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-2
- rpm-macros: do not define _qt5_archdatadir, _qt5_bindir in terms of _qt5_prefix anymore
* Sat May 26 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
--------------------------------------------------------------------------------
================================================================================
qt5-qt3d-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Qt3D QML bindings and C++ APIs
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
* Thu Mar 8 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.10.1-2
- BR: qt5-rpm-macros
--------------------------------------------------------------------------------
================================================================================
qt5-qtbase-5.11.1-7.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtBase components
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Thu Jul 26 2018 Than Ngo <than(a)redhat.com> - 5.11.1-7
- fixed FTBFS
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-6
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jul 10 2018 Pete Walter <pwalter(a)fedoraproject.org> - 5.11.1-5
- Rebuild for ICU 62
* Mon Jul 2 2018 Than Ngo <than(a)redhat.com> - 5.11.1-4
- fixed bz#1597110 - BRP mangle shebangs and calculation of provides should ignore backups
files
* Fri Jun 29 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-3
- apply sse2-related multilib hack on < f29 only
- safer %_qt5_prefix, %qt5_archdatadir ownership
- rebuild for %_qt5_prefix = %_prefix
* Sat Jun 23 2018 Than Ngo <than(a)redhat.com> - 5.11.1-2
- fixed #1592146, python3
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
- relax qt5-rpm-macros dep
- drop workaround for QTBUG-37417
- drop CMake-Restore-qt5_use_modules-function.patch (upstreamed)
* Mon Jun 18 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-3
- backport CMake-Restore-qt5_use_modules-function.patch
- %build: %ix86 --no-sse2 on < f29 only
* Wed May 30 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-2
- move libQt5EglFSDeviceIntegration to -gui (#1557223)
* Tue May 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- drop support for inject_optflags (not used since f23)
* Mon Apr 30 2018 Pete Walter <pwalter(a)fedoraproject.org> - 5.10.1-8
- Rebuild for ICU 61.1
* Thu Mar 8 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.10.1-7
- enforce qt5-rpm-macros versioning
- BR: gcc-c++
- Qt5.pc: fix version, add %check
--------------------------------------------------------------------------------
================================================================================
qt5-qtcanvas3d-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Canvas3d component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
* Thu Mar 8 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.10.1-2
- BR: qt5-rpm-macros
--------------------------------------------------------------------------------
================================================================================
qt5-qtcharts-5.11.1-4.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Charts component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 15 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-4
- use %{_qt5_archdatadir}/mkspecs
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtconnectivity-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Connectivity components
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtdatavis3d-5.11.1-1.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Qt Data Visualization component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 15 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
- use %make_build %ldconfig_scriptlets
- use %{_qt5_archdatadir}/mkspecs
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.10.0-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
qt5-qtdeclarative-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtDeclarative component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 15 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-3
- BR: /usr/bin/python
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
qt5-qtdoc-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Main Qt5 Reference Documentation
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build
- use unversioned BR: qt5-qtbase-devel
--------------------------------------------------------------------------------
================================================================================
qt5-qtenginio-1.6.2-16.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Enginio component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Tue May 29 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1.6.2-16
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
qt5-qtgamepad-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Gamepad component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 15 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-3
- use %{_qt5_archdatadir}/mkspecs
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtgraphicaleffects-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtGraphicalEffects component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build
--------------------------------------------------------------------------------
================================================================================
qt5-qtimageformats-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtImageFormats component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build
--------------------------------------------------------------------------------
================================================================================
qt5-qtlocation-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Location component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jul 10 2018 Pete Walter <pwalter(a)fedoraproject.org> - 5.11.1-2
- Rebuild for ICU 62
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- drop old G_INIT_VALUE patch (el6 too old anyway)
* Mon Apr 30 2018 Pete Walter <pwalter(a)fedoraproject.org> - 5.10.1-4
- Rebuild for ICU 61.1
--------------------------------------------------------------------------------
================================================================================
qt5-qtmultimedia-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Multimedia support
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtquickcontrols-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - module with set of QtQuick controls
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %license %make_build
--------------------------------------------------------------------------------
================================================================================
qt5-qtquickcontrols2-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - module with set of QtQuick controls for embedded
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtremoteobjects-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Qt Remote Objects
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 15 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-3
- use %{_qt5_archdatadir}/mkspecs
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %ldconfig_scriptlets %license %make_build
--------------------------------------------------------------------------------
================================================================================
qt5-qtscript-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtScript component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sat May 26 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
* Wed May 9 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.10.1-4
- %check: use 'timeout 180' to avoid hanging tests
--------------------------------------------------------------------------------
================================================================================
qt5-qtscxml-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - ScXml component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 15 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-3
- use %{_qt5_archdatadir}/mkspecs
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtsensors-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Sensors component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtserialbus-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - SerialPort component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 15 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-3
- use %{_qt5_archdatadir}/mkspecs/
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtserialport-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - SerialPort component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0, use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtspeech-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Speech component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtstyleplugins-5.0.0-27.fc28 (FEDORA-2018-bea1e0b465)
Classic Qt widget styles
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 13 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.0.0-27
- use %make_build %make_install
* Sun May 13 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.0.0-26
- drop qgtk2/bb10 conditionals
--------------------------------------------------------------------------------
================================================================================
qt5-qtsvg-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Support for rendering and displaying SVG
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qttools-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtTool components
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sat May 26 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build
* Thu Mar 8 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.10.1-2
- BR: qt5-rpm-macros
--------------------------------------------------------------------------------
================================================================================
qt5-qttranslations-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtTranslations module
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build
- make BR: qt5-qbase-devel unversioned
--------------------------------------------------------------------------------
================================================================================
qt5-qtvirtualkeyboard-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - VirtualKeyboard component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtwayland-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - Wayland platform support and QtCompositor module
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtwebchannel-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - WebChannel component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtwebengine-5.11.1-4.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtWebEngine components
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 15 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-4
- BR: /usr/bin/python
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jul 10 2018 Pete Walter <pwalter(a)fedoraproject.org> - 5.11.1-2
- Rebuild for ICU 62
* Fri Jun 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-2
- rebuild (qt5)
* Thu Jun 14 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- drop shadow build (to match other qt5 packages where it has been problematic)
- drop upstreamed patches
- rebase no-icudtl-dat.patch
- pull in upstream gcc8 FTBFS fix
- update clean_ffmpeg whitelist
- patches needswork: system-nspr-prtime,system-icu-utf,no-sse2,skia-neon,icu59
- minimal debug/debuginfo (for now)
- use macros %make_build %ldconfig_scriptlets %__ninja %__ninja_common_opts
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.10.1-7
- rebuild (qt5 5.11.0)
- Add patch by spot from the Fedora Chromium RPM for FTBFS with GCC 8 on i686
- include 0027-Fix-compilation-of-simplebrowser-example.patch (5.11 branch)
* Mon Apr 30 2018 Pete Walter <pwalter(a)fedoraproject.org> - 5.10.1-6
- Rebuild for ICU 61.1
--------------------------------------------------------------------------------
================================================================================
qt5-qtwebkit-5.212.0-0.27.alpha2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtWebKit components
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Jul 25 2018 Christian Dersch <lupinix(a)fedoraproject.org> -
5.212.0-0.27.alpha2
- Disable annobin for now, workaround for RHBZ #1608549
* Tue Jul 24 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.212.0-0.26.alpha2
- backport some pkgconfig-related upstream fixes
- use %ldconfig_scriptlets
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> -
5.212.0-0.25.alpha2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jul 10 2018 Pete Walter <pwalter(a)fedoraproject.org> - 5.212.0-0.24.alpha2
- Rebuild for ICU 62
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.212.0-0.23.alpha2
- rebuild (qt5)
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.212.0-0.22.alpha2
- rebuild (qt5)
- workaround gcc8 FTBFS with -fpermissive (#1582954)
* Mon Apr 30 2018 Pete Walter <pwalter(a)fedoraproject.org> - 5.212.0-0.21.alpha2
- Rebuild for ICU 61.1
--------------------------------------------------------------------------------
================================================================================
qt5-qtwebsockets-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - WebSockets component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtwebview-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - WebView component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 15 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-3
- use %{_qt5_archdatadir}/mkspecs
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtx11extras-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - X11 support library
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-2
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Jun 20 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0,
- use %make_build %ldconfig_scriptlets
--------------------------------------------------------------------------------
================================================================================
qt5-qtxmlpatterns-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465)
Qt5 - QtXmlPatterns component
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 5.11.1-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Sat Jun 30 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-2
- rebuild
* Tue Jun 19 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.1-1
- 5.11.1
* Wed May 23 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.11.0-1
- 5.11.0
--------------------------------------------------------------------------------
================================================================================
qt5ct-0.35-2.fc28 (FEDORA-2018-bea1e0b465)
Qt5 Configuration Tool
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 0.35-2
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
root-6.14.04-1.fc28 (FEDORA-2018-f639426cca)
Numerical data analysis framework
--------------------------------------------------------------------------------
Update Information:
Root version 6.14.04.
https://root.cern.ch/doc/v614/release-
notes.html#release-6.1404
--------------------------------------------------------------------------------
ChangeLog:
* Fri Aug 24 2018 Mattias Ellert <mattias.ellert(a)physics.uu.se> - 6.14.04-1
- Update to 6.14.04
- Drop patch accepted upstream: root-python-3.7.patch
* Thu Aug 23 2018 Nicolas Chauvet <kwizart(a)gmail.com> - 6.14.02-2
- Rebuilt for glew 2.1.0
--------------------------------------------------------------------------------
================================================================================
setBfree-0.8.8-1.fc28 (FEDORA-2018-6f112096f9)
A DSP Tonewheel Organ emulator
--------------------------------------------------------------------------------
Update Information:
Version 0.8.8
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Guido Aulisi <guido.aulisi(a)gmail.com> - 0.8.8-1
- Version 0.8.8
--------------------------------------------------------------------------------
================================================================================
skrooge-2.14.0-1.fc28 (FEDORA-2018-bea1e0b465)
Personal finances manager
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Jul 1 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.14.0-1
- skrooge-2.14.0 (#1594790)
* Thu Jun 21 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.13.0-3
- rebuild (qt5)
* Mon May 28 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.13.0-2
- rebuild (qt5)
* Tue May 8 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 2.13.0-1
- skrooge-2.13.0 (#1575967)
* Mon Apr 2 2018 Bill Nottingham <notting(a)splat.cc> - 2.12.0-2
- rebuild for libofx soname change
--------------------------------------------------------------------------------
================================================================================
switchboard-plug-sound-0.1.1-1.fc28 (FEDORA-2018-1eb665ea92)
Switchboard Sound Plug
--------------------------------------------------------------------------------
Update Information:
Update to version 0.1.1. Release notes:
https://github.com/elementary
/switchboard-plug-sound/releases/tag/0.1.1
--------------------------------------------------------------------------------
ChangeLog:
--------------------------------------------------------------------------------
================================================================================
tcpflow-1.5.0-2.fc28 (FEDORA-2018-5ad77cc979)
Network traffic recorder
--------------------------------------------------------------------------------
Update Information:
Update to latest upstream release tcpflow 1.5.0.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Terje Rosten <terje.rosten(a)ntnu.no> - 1.5.0-2
- Still issue with check
* Mon Aug 27 2018 Terje Rosten <terje.rosten(a)ntnu.no> - 1.5.0-1
- 1.5.0 (includes fix for rhbz#1614046
* Mon Jul 16 2018 Terje Rosten <terje.rosten(a)ntnu.no> - 1.4.5-9
- Add C++ compiler
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 1.4.5-8
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1614046 - CVE-2018-14938 tcpflow: integer overflow vulnerability in
wifipacp.cpp [fedora-all]
https://bugzilla.redhat.com/show_bug.cgi?id=1614046
--------------------------------------------------------------------------------
================================================================================
texmaker-5.0.2-6.fc28 (FEDORA-2018-bea1e0b465)
LaTeX editor
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1:5.0.2-6
- rebuild (qt5)
--------------------------------------------------------------------------------
================================================================================
ugene-1.31.0-3.fc28 (FEDORA-2018-bea1e0b465)
Integrated bioinformatics toolkit
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun Aug 26 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1.31.0-3
- (branch) rebuild for qt5
* Fri Aug 24 2018 Yuliya Algaer <yalgaer(a)fedoraproject.org> - 1.31.0-2
- New upstream release
--------------------------------------------------------------------------------
================================================================================
upx-3.95-1.fc28 (FEDORA-2018-0d8d15ff89)
Ultimate Packer for eXecutables
--------------------------------------------------------------------------------
Update Information:
3.95, fixes segfault issues. Also migrated to upstream's lzma fork.
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Gwyn Ciesla <limburgher@gmail> - 3.95-1
- 3.95.
- Switch to upstream's lzma fork.
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 3.94-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1612455 - upx (fedora 29) files generated are segfaulting
https://bugzilla.redhat.com/show_bug.cgi?id=1612455
[ 2 ] Bug #1550187 - Upx needs patch to work with new version of lzma-sdk
https://bugzilla.redhat.com/show_bug.cgi?id=1550187
--------------------------------------------------------------------------------
================================================================================
vim-8.1.328-1.fc28 (FEDORA-2018-e0d551a234)
The VIM editor
--------------------------------------------------------------------------------
Update Information:
The newest upstream commit
--------------------------------------------------------------------------------
ChangeLog:
* Mon Aug 27 2018 Zdenek Dohnal <zdohnal(a)redhat.com> - 2:8.1.328-1
- patchlevel 328
* Wed Aug 15 2018 Zdenek Dohnal <zdohnal(a)redhat.com> - 2:8.1.287-2
- vim-update.sh - add f29 branch
* Wed Aug 15 2018 Zdenek Dohnal <zdohnal(a)redhat.com> - 2:8.1.287-1
- patchlevel 287
--------------------------------------------------------------------------------
================================================================================
xdg-desktop-portal-kde-5.13.4-2.fc28 (FEDORA-2018-bea1e0b465)
Backend implementation for xdg-desktop-portal using Qt/KF5
--------------------------------------------------------------------------------
Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
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ChangeLog:
* Wed Aug 22 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 5.13.4-2
- rebuild
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yara-3.8.1-1.fc28 (FEDORA-2018-8344cb89ac)
Pattern matching Swiss knife for malware researchers
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Update Information:
bump to 3.8.1, fix CVE-2018-12034 and CVE-2018-12035
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ChangeLog:
* Mon Aug 27 2018 Michal Ambroz <rebus at, seznam.cz> - 3.8.1-1
- bump to 3.8.1 release (#1613093)
* Sat Jul 14 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 3.7.1-3
- Rebuilt for
https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
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References:
[ 1 ] Bug #1591947 - CVE-2018-12034 yara: out of bounds read in yr_execute_code in
libyara/exec.c. [epel-all]
https://bugzilla.redhat.com/show_bug.cgi?id=1591947
[ 2 ] Bug #1591946 - CVE-2018-12035 yara: out of bounds write in yr_execute_code in
libyara/exec.c [epel-all]
https://bugzilla.redhat.com/show_bug.cgi?id=1591946
[ 3 ] Bug #1591948 - CVE-2018-12034 yara: out of bounds read in yr_execute_code in
libyara/exec.c. [fedora-all]
https://bugzilla.redhat.com/show_bug.cgi?id=1591948
[ 4 ] Bug #1591945 - CVE-2018-12035 yara: out of bounds write in yr_execute_code in
libyara/exec.c [fedora-all]
https://bugzilla.redhat.com/show_bug.cgi?id=1591945
[ 5 ] Bug #1613093 - yara-3.8.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1613093
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================================================================================
yarock-1.3.1-2.fc28 (FEDORA-2018-bea1e0b465)
Lightweight, beautiful music player
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Update Information:
Qt 5.11.1 Release, see also
http://blog.qt.io/blog/2018/05/22/qt-5-11-released/
and
http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new
version of ugene introduces a lot of major features for NGS data analysis: 1.
Quality control: a new tool Trimmomatic was integrated for quality control of
NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality,
trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version
3.12.0. Graphical interface for the tool in UGENE was updated. It is now
possible to input hybrid data, for example, assemble Illumina and Oxford
Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy
classification of whole-genome shotgun sequencing data was developed. This
includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the
tools are also provided: NCBI taxonomy information; RefSeq data for viruses,
bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated.
--------------------------------------------------------------------------------
ChangeLog:
* Sun May 27 2018 Rex Dieter <rdieter(a)fedoraproject.org> - 1.3.1-2
- rebuild (qt5)
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