Dear members of the Fedora Science and Technology Special Interest Group,
I packaged Ray so that it can be included in Fedora as a scientific and engineering package (Biology and bioinformatics software).
The name of the software is Ray and it is licensed under the GPLv3.
Description:
Ray is a parallel software that computes de novo genome assemblies with next-generation sequencing data. Ray is written in C++ and can run in parallel on numerous interconnected computers using the message-passing interface (MPI) standard. Included: - Ray de novo assembly of single genomes - Ray Méta de novo assembly of metagenomes - Ray Communities microbe abundance + taxonomic profiling - Ray Ontologies gene ontology profiling
Please review these at your convenience:
Spec URL: https://raw.github.com/sebhtml/ray-packaging-for-Fedora/master/2.1.0/ray.spe...
SRPM URL: https://github.com/sebhtml/ray-packaging-for-Fedora/raw/master/2.1.0/ray-2.1...
Upstream tarball URL: http://iweb.dl.sourceforge.net/project/denovoassembler/Ray-v2.1.0.tar.bz2
Let me know what I need to change.
Also, do I need to open an account to become a package collection maintainer ?
Thanks,
Sébastien
Package Review => https://bugzilla.redhat.com/show_bug.cgi?id=872783
Since it's my first package, I need a sponsor.
On 11/02/2012 10:25 PM, Sébastien Boisvert wrote:
Dear members of the Fedora Science and Technology Special Interest Group,
I packaged Ray so that it can be included in Fedora as a scientific and engineering package (Biology and bioinformatics software).
The name of the software is Ray and it is licensed under the GPLv3.
Description:
Ray is a parallel software that computes de novo genome assemblies with next-generation sequencing data. Ray is written in C++ and can run in parallel on numerous interconnected computers using the message-passing interface (MPI) standard. Included:
- Ray de novo assembly of single genomes
- Ray Méta de novo assembly of metagenomes
- Ray Communities microbe abundance + taxonomic profiling
- Ray Ontologies gene ontology profiling
Please review these at your convenience:
Spec URL: https://raw.github.com/sebhtml/ray-packaging-for-Fedora/master/2.1.0/ray.spe...
SRPM URL: https://github.com/sebhtml/ray-packaging-for-Fedora/raw/master/2.1.0/ray-2.1...
Upstream tarball URL: http://iweb.dl.sourceforge.net/project/denovoassembler/Ray-v2.1.0.tar.bz2
Let me know what I need to change.
Also, do I need to open an account to become a package collection maintainer ?
Thanks,
Sébastien
scitech mailing list scitech@lists.fedoraproject.org https://admin.fedoraproject.org/mailman/listinfo/scitech
Hi Sébastien,
On Sat, Nov 3, 2012 at 1:59 PM, Sébastien Boisvert sebastien.boisvert.3@ulaval.ca wrote:
Package Review => https://bugzilla.redhat.com/show_bug.cgi?id=872783
Since it's my first package, I need a sponsor.
Although it may be possible that somebody from here can sponsor you, you are encourage to send an email introducing yourself and your package to the fedora-devel mailing list [1]. In case you haven't, please also read the guidelines here so that you get a better idea of the process [2].
[1] https://lists.fedoraproject.org/mailman/listinfo/devel [2] http://fedoraproject.org/wiki/How_to_get_sponsored_into_the_packager_group#C...
Good Luck. -Amit
Thanks, I'll do that.
On 11/03/2012 12:32 AM, Amit Saha wrote:
Hi Sébastien,
On Sat, Nov 3, 2012 at 1:59 PM, Sébastien Boisvert sebastien.boisvert.3@ulaval.ca wrote:
Package Review => https://bugzilla.redhat.com/show_bug.cgi?id=872783
Since it's my first package, I need a sponsor.
Although it may be possible that somebody from here can sponsor you, you are encourage to send an email introducing yourself and your package to the fedora-devel mailing list [1]. In case you haven't, please also read the guidelines here so that you get a better idea of the process [2].
[1] https://lists.fedoraproject.org/mailman/listinfo/devel [2] http://fedoraproject.org/wiki/How_to_get_sponsored_into_the_packager_group#C...
Good Luck. -Amit
On 11/03/2012 02:25 AM, Sébastien Boisvert wrote:
Dear members of the Fedora Science and Technology Special Interest Group,
I packaged Ray so that it can be included in Fedora as a scientific and engineering package (Biology and bioinformatics software).
The name of the software is Ray and it is licensed under the GPLv3.
Description:
Ray is a parallel software that computes de novo genome assemblies with next-generation sequencing data. Ray is written in C++ and can run in parallel on numerous interconnected computers using the message-passing interface (MPI) standard. Included:
- Ray de novo assembly of single genomes
- Ray Méta de novo assembly of metagenomes
- Ray Communities microbe abundance + taxonomic profiling
- Ray Ontologies gene ontology profiling
Please review these at your convenience:
Spec URL: https://raw.github.com/sebhtml/ray-packaging-for-Fedora/master/2.1.0/ray.spe...
SRPM URL: https://github.com/sebhtml/ray-packaging-for-Fedora/raw/master/2.1.0/ray-2.1...
Upstream tarball URL: http://iweb.dl.sourceforge.net/project/denovoassembler/Ray-v2.1.0.tar.bz2
Let me know what I need to change.
Also, do I need to open an account to become a package collection maintainer ?
Thanks,
Sébastien
Just to reinforce the advice in comment #14 after your remark on comment #6
"After reading Fedora guidelines: - Removed symbols that are not U.S. American English from man page"
You do not need to change the symbols since the guidelines do not require it.
Thanks.
I fixed that.
But help2man --locale en_US.UTF-8 throws an error
I filled a bug here for help2man
https://bugzilla.redhat.com/show_bug.cgi?id=872783#c19
On 11/05/2012 10:16 AM, José Matos wrote:
On 11/03/2012 02:25 AM, Sébastien Boisvert wrote:
Dear members of the Fedora Science and Technology Special Interest Group,
I packaged Ray so that it can be included in Fedora as a scientific and engineering package (Biology and bioinformatics software).
The name of the software is Ray and it is licensed under the GPLv3.
Description:
Ray is a parallel software that computes de novo genome assemblies with next-generation sequencing data. Ray is written in C++ and can run in parallel on numerous interconnected computers using the message-passing interface (MPI) standard. Included:
- Ray de novo assembly of single genomes
- Ray Méta de novo assembly of metagenomes
- Ray Communities microbe abundance + taxonomic profiling
- Ray Ontologies gene ontology profiling
Please review these at your convenience:
Spec URL: https://raw.github.com/sebhtml/ray-packaging-for-Fedora/master/2.1.0/ray.spe...
SRPM URL: https://github.com/sebhtml/ray-packaging-for-Fedora/raw/master/2.1.0/ray-2.1...
Upstream tarball URL: http://iweb.dl.sourceforge.net/project/denovoassembler/Ray-v2.1.0.tar.bz2
Let me know what I need to change.
Also, do I need to open an account to become a package collection maintainer ?
Thanks,
Sébastien
Just to reinforce the advice in comment #14 after your remark on comment #6
"After reading Fedora guidelines:
- Removed symbols that are not U.S. American English from man page"
You do not need to change the symbols since the guidelines do not require it.
scitech@lists.fedoraproject.org