Pushed, thanks.
On 06/24/2013 11:47 AM, Martin Milata wrote:
The satyr.Distances constructor can now take list of any type of threads as an argument. Closes #63.
Signed-off-by: Martin Milata mmilata@redhat.com
python/py_metrics.c | 45 +++++++++++++++++++++++++++++---------------- tests/python/metrics.py | 6 +++--- 2 files changed, 32 insertions(+), 19 deletions(-)
diff --git a/python/py_metrics.c b/python/py_metrics.c index 78403b2..c43fd02 100644 --- a/python/py_metrics.c +++ b/python/py_metrics.c @@ -1,13 +1,15 @@ #include "py_metrics.h" -#include "py_gdb_thread.h" +#include "py_base_thread.h" #include "strbuf.h" #include "distance.h"
#define distances_doc "satyr.Distances - class representing distances between objects\n" \ "Usage:\n" \ "satyr.Distances(m, n) - creates an m-by-n distance matrix\n" \
"satyr.Distances(dist_name, [threads], m) - compares first m threads with others\n" \
"dist_name: \"jaccard\" or \"levenshtein\"\n"
"satyr.Distances([threads], m, dist_type=DISTANCE_LEVENSHTEIN) \n"\
" - compares first m threads with others\n" \
"dist_type (optional): DISTANCE_LEVENSHTEIN, DISTANCE_JACCARD \n"\
" or DISTANCE_DAMERAU_LEVENSHTEIN\n"
#define di_get_size_doc "Usage: distances.get_size()\n" \ "Returns: (m, n) - size of the distance matrix" @@ -98,24 +100,35 @@ sr_py_distances_new(PyTypeObject *object, PyObject *args, PyObject *kwds)
PyObject * thread_list; int i, m, n;
- const char *dist_name;
- int dist_type = SR_DISTANCE_LEVENSHTEIN;
- static const char *kwlist[] = { "threads", "m", "dist_type", NULL };
- if (PyArg_ParseTuple(args, "sO!i", &dist_name, &PyList_Type, &thread_list, &m))
if (PyArg_ParseTupleAndKeywords(args, kwds, "O!i|i", (char **)kwlist,
&PyList_Type, &thread_list, &m, &dist_type))
{ n = PyList_Size(thread_list); struct sr_thread *threads[n];
PyTypeObject *thread_type = NULL; for (i = 0; i < n; i++) { PyObject *obj = PyList_GetItem(thread_list, i);
if (!PyObject_TypeCheck(obj, &sr_py_gdb_thread_type))
if (!PyObject_TypeCheck(obj, &sr_py_base_thread_type)) {
PyErr_SetString(PyExc_TypeError, "Must be a list of satyr.Thread objects");
PyErr_SetString(PyExc_TypeError, "Must be a list of satyr.BaseThread objects"); return NULL; }
struct sr_py_gdb_thread *to = (struct sr_py_gdb_thread*)obj;
if (thread_prepare_linked_list(to) < 0)
/* check that the type is the same as in the previous thread */
if (thread_type && obj->ob_type != thread_type)
{
PyErr_SetString(PyExc_TypeError, "All threads in the list must have the same type");
return NULL;
}
thread_type = obj->ob_type;
struct sr_py_base_thread *to = (struct sr_py_base_thread*)obj;
if (frames_prepare_linked_list(to) < 0) { return NULL; }
@@ -127,15 +140,15 @@ sr_py_distances_new(PyTypeObject *object, PyObject *args, PyObject *kwds) return NULL; }
enum sr_distance_type dist_type;
if (dist_type < 0 || dist_type >= SR_DISTANCE_NUM)
{
PyErr_SetString(PyExc_ValueError, "Invalid distance type");
return NULL;
}
if (!strcmp(dist_name, "jaccard"))
dist_type = SR_DISTANCE_JACCARD;
else if (!strcmp(dist_name, "levenshtein"))
dist_type = SR_DISTANCE_LEVENSHTEIN;
else
if (dist_type == SR_DISTANCE_JARO_WINKLER) {
PyErr_SetString(PyExc_ValueError, "Unknown name of distance function");
PyErr_SetString(PyExc_ValueError, "Cannot use DISTANCE_JARO_WINKLER as it is not a metric"); return NULL; }
diff --git a/tests/python/metrics.py b/tests/python/metrics.py index 703bbdc..ea79d10 100755 --- a/tests/python/metrics.py +++ b/tests/python/metrics.py @@ -25,14 +25,14 @@ class TestDistances(unittest.TestCase): thread1 = satyr.GdbThread("f1 lib1\n", True) thread2 = satyr.GdbThread("f1 lib1\n", True)
distances = satyr.Distances("levenshtein", [thread1, thread2], 2)
distances = satyr.Distances([thread1, thread2], 2, satyr.DISTANCE_LEVENSHTEIN) self.assertAlmostEqual(distances.get_distance(0, 1), 0.0) # original backtrace thread1 = satyr.GdbThread("f1 lib1\nf2 lib2\nf3 lib3\n", True) thread2 = satyr.GdbThread("f1 lib1\nf4 lib4\nf5 lib5\n", True)
distances = satyr.Distances("levenshtein", [thread1, thread2], 2)
distances = satyr.Distances([thread1, thread2], 2, satyr.DISTANCE_LEVENSHTEIN) self.assertNotAlmostEqual(distances.get_distance(0, 1), 0.0) self.assertAlmostEqual(distances.get_distance(0, 1), 0.66666668)
@@ -41,7 +41,7 @@ class TestDistances(unittest.TestCase): thread1.frames[1:] = [] thread2.frames[1:] = []
distances = satyr.Distances("levenshtein", [thread1, thread2], 2)
distances = satyr.Distances([thread1, thread2], 2, satyr.DISTANCE_LEVENSHTEIN) self.assertAlmostEqual(distances.get_distance(0, 1), 0.0)
def test_distance_gdb(self):